RNA–Protein interactions for RNA: ENST00000282561.3

GJA1-201, Transcript of gap junction protein alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GJA1, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GJA1-201ENST00000282561 NISCHQ9Y2I1 1504 aa15.63■□□□□ 0.09
GJA1-201ENST00000282561 SLC24A1O60721 1099 aa13.48□□□□□ -0.25
GJA1-201ENST00000282561 SHROOM4Q9ULL8 1493 aa13.31□□□□□ -0.28
GJA1-201ENST00000282561 CHIC1Q5VXU3 224 aa13.31□□□□□ -0.28
GJA1-201ENST00000282561 CCDC180Q9P1Z9 1646 aa13.23□□□□□ -0.29
GJA1-201ENST00000282561 ZCCHC6Q5VYS8 1495 aaKnown RBP13.23□□□□□ -0.29
GJA1-201ENST00000282561 SUPT5HO00267 1087 aaKnown RBP13.14□□□□□ -0.31
GJA1-201ENST00000282561 DCAF8L2P0C7V8 631 aa12.91□□□□□ -0.34
GJA1-201ENST00000282561 DCAF1Q9Y4B6 1507 aa12.86□□□□□ -0.35
GJA1-201ENST00000282561 MYO15BQ96JP2 1530 aa12.75□□□□□ -0.37
GJA1-201ENST00000282561 EHMT2Q96KQ7 1210 aa12.73□□□□□ -0.37
GJA1-201ENST00000282561 HRCP23327 699 aa12.62□□□□□ -0.39
GJA1-201ENST00000282561 PCGF6Q9BYE7 350 aa12.53□□□□□ -0.4
GJA1-201ENST00000282561 ABCC9O60706 1549 aa12.47□□□□□ -0.41
GJA1-201ENST00000282561 LOC105371045A0A1W2PR82 267 aa12.45□□□□□ -0.42
GJA1-201ENST00000282561 AEBP2Q6ZN18 517 aaPredicted RBP12.43□□□□□ -0.42
GJA1-201ENST00000282561 RSF1Q96T23 1441 aaPredicted RBP12.4□□□□□ -0.42
GJA1-201ENST00000282561 SCRIBQ14160 1630 aa12.37□□□□□ -0.43
GJA1-201ENST00000282561 PLPPR3Q6T4P5 718 aa12.33□□□□□ -0.44
GJA1-201ENST00000282561 TRIM26Q12899 539 aaPredicted RBP12.32□□□□□ -0.44
GJA1-201ENST00000282561 TRIM41Q8WV44 630 aa12.28□□□□□ -0.44
GJA1-201ENST00000282561 RB1CC1Q8TDY2 1594 aa12.28□□□□□ -0.44
GJA1-201ENST00000282561 PPARGC1BQ86YN6 1023 aaKnown RBP12.27□□□□□ -0.45
GJA1-201ENST00000282561 NACADO15069 1562 aa12.24□□□□□ -0.45
GJA1-201ENST00000282561 RTN4Q9NQC3 1192 aaKnown RBP12.24□□□□□ -0.45
GJA1-201ENST00000282561 CECR2Q9BXF3 1484 aa12.15□□□□□ -0.46
GJA1-201ENST00000282561 ZEB1P37275 1124 aaPredicted RBP12.13□□□□□ -0.47
GJA1-201ENST00000282561 MROH2BQ7Z745 1585 aa12.12□□□□□ -0.47
GJA1-201ENST00000282561 FAM9AQ8IZU1 332 aaPredicted RBP12.12□□□□□ -0.47
GJA1-201ENST00000282561 DAXXQ9UER7 740 aaPredicted RBP12.11□□□□□ -0.47
GJA1-201ENST00000282561 WIZO95785 1651 aa12.04□□□□□ -0.48
GJA1-201ENST00000282561 NCBP3Q53F19 620 aaKnown RBP12.03□□□□□ -0.48
GJA1-201ENST00000282561 PHF23Q9BUL5 403 aaPredicted RBP12.02□□□□□ -0.49
GJA1-201ENST00000282561 BAZ1AQ9NRL2 1556 aaPredicted RBP12□□□□□ -0.49
GJA1-201ENST00000282561 AMER1Q5JTC6 1135 aaPredicted RBP11.98□□□□□ -0.49
GJA1-201ENST00000282561 EIF4G1Q04637 1599 aaKnown RBP11.92□□□□□ -0.5
GJA1-201ENST00000282561 TOP2AP11388 1531 aaKnown RBP11.89□□□□□ -0.51
GJA1-201ENST00000282561 KCNA4P22459 653 aa11.88□□□□□ -0.51
GJA1-201ENST00000282561 CSRNP3Q8WYN3 585 aa11.88□□□□□ -0.51
GJA1-201ENST00000282561 SMARCA4P51532 1647 aa11.86□□□□□ -0.51
GJA1-201ENST00000282561 CCDC88BA6NC98 1476 aa11.85□□□□□ -0.51
GJA1-201ENST00000282561 SMARCA2P51531 1590 aa11.81□□□□□ -0.52
GJA1-201ENST00000282561 ABCC8Q09428 1581 aa11.8□□□□□ -0.52
GJA1-201ENST00000282561 WRNQ14191 1432 aaPredicted RBP eCLIP11.79□□□□□ -0.52
GJA1-201ENST00000282561 UNC13AQ9UPW8 1703 aa11.76□□□□□ -0.53
GJA1-201ENST00000282561 EEA1Q15075 1411 aa11.76□□□□□ -0.53
GJA1-201ENST00000282561 CCER1Q8TC90 406 aaPredicted RBP11.76□□□□□ -0.53
GJA1-201ENST00000282561 TNIKQ9UKE5 1360 aa11.76□□□□□ -0.53
GJA1-201ENST00000282561 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.75□□□□□ -0.53
GJA1-201ENST00000282561 SOGA1O94964 1423 aa11.74□□□□□ -0.53
GJA1-201ENST00000282561 CEP162Q5TB80 1403 aa11.74□□□□□ -0.53
GJA1-201ENST00000282561 UBTFP17480 764 aaKnown RBP11.68□□□□□ -0.54
GJA1-201ENST00000282561 PRKCSHP14314 528 aaPredicted RBP11.67□□□□□ -0.54
GJA1-201ENST00000282561 PEG3Q9GZU2 1588 aa11.66□□□□□ -0.54
GJA1-201ENST00000282561 RUSC2Q8N2Y8 1516 aa11.66□□□□□ -0.54
GJA1-201ENST00000282561 PABPN1Q86U42 306 aaKnown RBP eCLIP11.65□□□□□ -0.54
GJA1-201ENST00000282561 BICRAQ9NZM4 1560 aa11.65□□□□□ -0.54
GJA1-201ENST00000282561 GOLGA3Q08378 1498 aa11.64□□□□□ -0.55
GJA1-201ENST00000282561 SCAF1Q9H7N4 1312 aaKnown RBP11.64□□□□□ -0.55
GJA1-201ENST00000282561 TTBK1Q5TCY1 1321 aaPredicted RBP11.61□□□□□ -0.55
GJA1-201ENST00000282561 PELP1Q8IZL8 1130 aaKnown RBP11.6□□□□□ -0.55
GJA1-201ENST00000282561 DIEXFQ68CQ4 756 aaKnown RBP11.59□□□□□ -0.55
GJA1-201ENST00000282561 CEP164Q9UPV0 1460 aa11.58□□□□□ -0.56
GJA1-201ENST00000282561 ATAD2BQ9ULI0 1458 aa11.55□□□□□ -0.56
GJA1-201ENST00000282561 KIF21BO75037 1637 aa11.54□□□□□ -0.56
GJA1-201ENST00000282561 ACIN1Q9UKV3 1341 aaKnown RBP11.54□□□□□ -0.56
GJA1-201ENST00000282561 SYNJ1O43426 1573 aa11.54□□□□□ -0.56
GJA1-201ENST00000282561 BAZ1BQ9UIG0 1483 aaKnown RBP11.52□□□□□ -0.57
GJA1-201ENST00000282561 CLIP1P30622 1438 aa11.51□□□□□ -0.57
GJA1-201ENST00000282561 ARXQ96QS3 562 aa11.5□□□□□ -0.57
GJA1-201ENST00000282561 CENPBP07199 599 aaPredicted RBP11.49□□□□□ -0.57
GJA1-201ENST00000282561 ZNF316A6NFI3 1004 aaPredicted RBP11.49□□□□□ -0.57
GJA1-201ENST00000282561 NEUROD1Q13562 356 aa11.49□□□□□ -0.57
GJA1-201ENST00000282561 VPS8Q8N3P4 1428 aa11.48□□□□□ -0.57
GJA1-201ENST00000282561 APLP2Q06481 763 aa11.46□□□□□ -0.57
GJA1-201ENST00000282561 RAPGEF2Q9Y4G8 1499 aa11.45□□□□□ -0.58
GJA1-201ENST00000282561 HNRNPUL2Q1KMD3 747 aaKnown RBP11.44□□□□□ -0.58
GJA1-201ENST00000282561 TOP2BQ02880 1626 aa11.43□□□□□ -0.58
GJA1-201ENST00000282561 TIMELESSQ9UNS1 1208 aa11.43□□□□□ -0.58
GJA1-201ENST00000282561 GTF3C3Q9Y5Q9 886 aa11.39□□□□□ -0.59
GJA1-201ENST00000282561 BIVM-ERCC5R4GMW8 1640 aa11.37□□□□□ -0.59
GJA1-201ENST00000282561 ERICH3Q5RHP9 1530 aa11.36□□□□□ -0.59
GJA1-201ENST00000282561 PRXQ9BXM0 1461 aa11.36□□□□□ -0.59
GJA1-201ENST00000282561 RANGAP1P46060 587 aaPredicted RBP11.35□□□□□ -0.59
GJA1-201ENST00000282561 NCAPD3P42695 1498 aa11.34□□□□□ -0.59
GJA1-201ENST00000282561 CLSPNQ9HAW4 1339 aa11.33□□□□□ -0.6
GJA1-201ENST00000282561 HMGXB3Q12766 1538 aa11.32□□□□□ -0.6
GJA1-201ENST00000282561 TAOK2Q9UL54 1235 aa11.32□□□□□ -0.6
GJA1-201ENST00000282561 MIER1Q8N108 512 aa11.3□□□□□ -0.6
GJA1-201ENST00000282561 KIF27Q86VH2 1401 aa11.29□□□□□ -0.6
GJA1-201ENST00000282561 ARAP1Q96P48 1450 aa11.29□□□□□ -0.6
GJA1-201ENST00000282561 SLC4A1APQ9BWU0 796 aaKnown RBP11.29□□□□□ -0.6
GJA1-201ENST00000282561 CUX1P39880 1505 aa11.28□□□□□ -0.6
GJA1-201ENST00000282561 KANK4Q5T7N3 995 aaPredicted RBP11.27□□□□□ -0.61
GJA1-201ENST00000282561 CFTRP13569 1480 aa11.27□□□□□ -0.61
GJA1-201ENST00000282561 YTHDC1Q96MU7 727 aaKnown RBP11.25□□□□□ -0.61
GJA1-201ENST00000282561 DHX57Q6P158 1386 aaKnown RBP11.25□□□□□ -0.61
GJA1-201ENST00000282561 TULP1O00294 542 aaPredicted RBP11.25□□□□□ -0.61
GJA1-201ENST00000282561 RRBP1Q9P2E9 1410 aaKnown RBP11.24□□□□□ -0.61
GJA1-201ENST00000282561 ARHGAP35Q9NRY4 1499 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms