Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHB3Q9Y5E6 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PCDHB3Q9Y5E6 AC060766.5-201ENST00000590539 871 ntBASIC19.5■□□□□ 0.71
PCDHB3Q9Y5E6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PCDHB3Q9Y5E6 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB3Q9Y5E6 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHB3Q9Y5E6 AC105020.6-201ENST00000621523 1217 ntBASIC19.5■□□□□ 0.71
PCDHB3Q9Y5E6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB3Q9Y5E6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
PCDHB3Q9Y5E6 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB3Q9Y5E6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB3Q9Y5E6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB3Q9Y5E6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.5■□□□□ 0.71
PCDHB3Q9Y5E6 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
PCDHB3Q9Y5E6 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB3Q9Y5E6 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHB3Q9Y5E6 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB3Q9Y5E6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB3Q9Y5E6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
PCDHB3Q9Y5E6 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDHB3Q9Y5E6 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
PCDHB3Q9Y5E6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB3Q9Y5E6 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB3Q9Y5E6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.49■□□□□ 0.71
PCDHB3Q9Y5E6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDHB3Q9Y5E6 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHB3Q9Y5E6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDHB3Q9Y5E6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PCDHB3Q9Y5E6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.49■□□□□ 0.71
PCDHB3Q9Y5E6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB3Q9Y5E6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PCDHB3Q9Y5E6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB3Q9Y5E6 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB3Q9Y5E6 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB3Q9Y5E6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB3Q9Y5E6 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB3Q9Y5E6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHB3Q9Y5E6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB3Q9Y5E6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.48■□□□□ 0.71
PCDHB3Q9Y5E6 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PCDHB3Q9Y5E6 RPS2P4-201ENST00000476944 856 ntBASIC19.48■□□□□ 0.71
PCDHB3Q9Y5E6 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB3Q9Y5E6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHB3Q9Y5E6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB3Q9Y5E6 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHB3Q9Y5E6 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB3Q9Y5E6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PCDHB3Q9Y5E6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHB3Q9Y5E6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHB3Q9Y5E6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB3Q9Y5E6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB3Q9Y5E6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PCDHB3Q9Y5E6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB3Q9Y5E6 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB3Q9Y5E6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB3Q9Y5E6 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB3Q9Y5E6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB3Q9Y5E6 AC011484.1-201ENST00000377652 1995 ntBASIC19.47■□□□□ 0.71
PCDHB3Q9Y5E6 PGM5P4-201ENST00000421970 445 ntBASIC19.47■□□□□ 0.71
PCDHB3Q9Y5E6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.47■□□□□ 0.71
PCDHB3Q9Y5E6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDHB3Q9Y5E6 AC087633.2-202ENST00000565166 1439 ntBASIC19.47■□□□□ 0.71
PCDHB3Q9Y5E6 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB3Q9Y5E6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
PCDHB3Q9Y5E6 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB3Q9Y5E6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PCDHB3Q9Y5E6 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB3Q9Y5E6 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB3Q9Y5E6 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHB3Q9Y5E6 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHB3Q9Y5E6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB3Q9Y5E6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PCDHB3Q9Y5E6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB3Q9Y5E6 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB3Q9Y5E6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB3Q9Y5E6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB3Q9Y5E6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHB3Q9Y5E6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB3Q9Y5E6 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB3Q9Y5E6 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB3Q9Y5E6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB3Q9Y5E6 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHB3Q9Y5E6 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHB3Q9Y5E6 UNC93B4-201ENST00000505679 747 ntBASIC19.46■□□□□ 0.71
PCDHB3Q9Y5E6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.46■□□□□ 0.71
PCDHB3Q9Y5E6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.46■□□□□ 0.71
PCDHB3Q9Y5E6 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB3Q9Y5E6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHB3Q9Y5E6 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB3Q9Y5E6 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PCDHB3Q9Y5E6 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHB3Q9Y5E6 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB3Q9Y5E6 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDHB3Q9Y5E6 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB3Q9Y5E6 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHB3Q9Y5E6 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB3Q9Y5E6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB3Q9Y5E6 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHB3Q9Y5E6 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.45■□□□□ 0.7
PCDHB3Q9Y5E6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms