Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NUP35Q8NFH5 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
NUP35Q8NFH5 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
NUP35Q8NFH5 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
NUP35Q8NFH5 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
NUP35Q8NFH5 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.89□□□□□ -0.03
NUP35Q8NFH5 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC14.89□□□□□ -0.03
NUP35Q8NFH5 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC14.89□□□□□ -0.03
NUP35Q8NFH5 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NUP35Q8NFH5 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUP35Q8NFH5 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
NUP35Q8NFH5 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUP35Q8NFH5 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NUP35Q8NFH5 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUP35Q8NFH5 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUP35Q8NFH5 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC14.89□□□□□ -0.03
NUP35Q8NFH5 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC14.89□□□□□ -0.03
NUP35Q8NFH5 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUP35Q8NFH5 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC14.89□□□□□ -0.03
NUP35Q8NFH5 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUP35Q8NFH5 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUP35Q8NFH5 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUP35Q8NFH5 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUP35Q8NFH5 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC14.89□□□□□ -0.03
NUP35Q8NFH5 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC14.89□□□□□ -0.03
NUP35Q8NFH5 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NUP35Q8NFH5 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC14.89□□□□□ -0.03
NUP35Q8NFH5 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC14.89□□□□□ -0.03
NUP35Q8NFH5 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC14.89□□□□□ -0.03
NUP35Q8NFH5 CROCCP3-202ENST00000420820 1947 ntBASIC14.89□□□□□ -0.03
NUP35Q8NFH5 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
NUP35Q8NFH5 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC14.89□□□□□ -0.03
NUP35Q8NFH5 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
NUP35Q8NFH5 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUP35Q8NFH5 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUP35Q8NFH5 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC14.89□□□□□ -0.03
NUP35Q8NFH5 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC14.89□□□□□ -0.03
NUP35Q8NFH5 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NUP35Q8NFH5 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUP35Q8NFH5 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUP35Q8NFH5 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUP35Q8NFH5 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NUP35Q8NFH5 AC104581.1-202ENST00000635932 2618 ntBASIC14.88□□□□□ -0.03
NUP35Q8NFH5 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.88□□□□□ -0.03
NUP35Q8NFH5 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NUP35Q8NFH5 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUP35Q8NFH5 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
NUP35Q8NFH5 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUP35Q8NFH5 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUP35Q8NFH5 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUP35Q8NFH5 PTCHD3P2-201ENST00000424937 1205 ntBASIC14.88□□□□□ -0.03
NUP35Q8NFH5 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC14.88□□□□□ -0.03
NUP35Q8NFH5 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC14.88□□□□□ -0.03
NUP35Q8NFH5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC14.88□□□□□ -0.03
NUP35Q8NFH5 AC018470.1-201ENST00000624790 3129 ntBASIC14.88□□□□□ -0.03
NUP35Q8NFH5 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
NUP35Q8NFH5 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC14.88□□□□□ -0.03
NUP35Q8NFH5 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NUP35Q8NFH5 PODN-203ENST00000395871 2744 ntTSL 5 BASIC14.88□□□□□ -0.03
NUP35Q8NFH5 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUP35Q8NFH5 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUP35Q8NFH5 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUP35Q8NFH5 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.88□□□□□ -0.03
NUP35Q8NFH5 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC14.88□□□□□ -0.03
NUP35Q8NFH5 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NUP35Q8NFH5 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC14.88□□□□□ -0.03
NUP35Q8NFH5 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUP35Q8NFH5 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUP35Q8NFH5 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUP35Q8NFH5 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUP35Q8NFH5 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NUP35Q8NFH5 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUP35Q8NFH5 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NUP35Q8NFH5 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUP35Q8NFH5 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUP35Q8NFH5 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC14.87□□□□□ -0.03
NUP35Q8NFH5 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUP35Q8NFH5 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NUP35Q8NFH5 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NUP35Q8NFH5 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC14.87□□□□□ -0.03
NUP35Q8NFH5 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NUP35Q8NFH5 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUP35Q8NFH5 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUP35Q8NFH5 AL390961.4-201ENST00000623958 2535 ntBASIC14.87□□□□□ -0.03
NUP35Q8NFH5 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUP35Q8NFH5 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUP35Q8NFH5 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUP35Q8NFH5 AC239859.2-201ENST00000444165 318 ntBASIC14.87□□□□□ -0.03
NUP35Q8NFH5 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NUP35Q8NFH5 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUP35Q8NFH5 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUP35Q8NFH5 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUP35Q8NFH5 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NUP35Q8NFH5 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUP35Q8NFH5 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUP35Q8NFH5 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NUP35Q8NFH5 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
NUP35Q8NFH5 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUP35Q8NFH5 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
NUP35Q8NFH5 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms