Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
C3orf56Q8N813 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
C3orf56Q8N813 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
C3orf56Q8N813 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
C3orf56Q8N813 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.6■□□□□ 0.09
C3orf56Q8N813 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.6■□□□□ 0.09
C3orf56Q8N813 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
C3orf56Q8N813 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.6■□□□□ 0.09
C3orf56Q8N813 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.6■□□□□ 0.09
C3orf56Q8N813 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.6■□□□□ 0.09
C3orf56Q8N813 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
C3orf56Q8N813 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
C3orf56Q8N813 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
C3orf56Q8N813 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
C3orf56Q8N813 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
C3orf56Q8N813 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.6■□□□□ 0.09
C3orf56Q8N813 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
C3orf56Q8N813 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC15.6■□□□□ 0.09
C3orf56Q8N813 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
C3orf56Q8N813 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
C3orf56Q8N813 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
C3orf56Q8N813 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C3orf56Q8N813 USP48-205ENST00000421625 2818 ntTSL 2 BASIC15.59■□□□□ 0.09
C3orf56Q8N813 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
C3orf56Q8N813 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
C3orf56Q8N813 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
C3orf56Q8N813 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
C3orf56Q8N813 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
C3orf56Q8N813 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C3orf56Q8N813 FAM99A-202ENST00000538190 1989 ntBASIC15.59■□□□□ 0.09
C3orf56Q8N813 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
C3orf56Q8N813 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
C3orf56Q8N813 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C3orf56Q8N813 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C3orf56Q8N813 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.59■□□□□ 0.09
C3orf56Q8N813 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.59■□□□□ 0.09
C3orf56Q8N813 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C3orf56Q8N813 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.59■□□□□ 0.09
C3orf56Q8N813 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.59■□□□□ 0.09
C3orf56Q8N813 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.59■□□□□ 0.09
C3orf56Q8N813 AP000550.4-202ENST00000639755 178 ntBASIC15.59■□□□□ 0.09
C3orf56Q8N813 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
C3orf56Q8N813 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C3orf56Q8N813 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C3orf56Q8N813 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.59■□□□□ 0.09
C3orf56Q8N813 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
C3orf56Q8N813 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
C3orf56Q8N813 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
C3orf56Q8N813 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
C3orf56Q8N813 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
C3orf56Q8N813 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC15.58■□□□□ 0.08
C3orf56Q8N813 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
C3orf56Q8N813 TSPY14P-201ENST00000303979 915 ntBASIC15.58■□□□□ 0.08
C3orf56Q8N813 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.58■□□□□ 0.08
C3orf56Q8N813 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
C3orf56Q8N813 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
C3orf56Q8N813 CRYGFP-201ENST00000418459 633 ntBASIC15.58■□□□□ 0.08
C3orf56Q8N813 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.58■□□□□ 0.08
C3orf56Q8N813 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
C3orf56Q8N813 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
C3orf56Q8N813 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
C3orf56Q8N813 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.58■□□□□ 0.08
C3orf56Q8N813 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.58■□□□□ 0.08
C3orf56Q8N813 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.58■□□□□ 0.08
C3orf56Q8N813 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
C3orf56Q8N813 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC15.58■□□□□ 0.08
C3orf56Q8N813 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
C3orf56Q8N813 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.58■□□□□ 0.08
C3orf56Q8N813 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
C3orf56Q8N813 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.58■□□□□ 0.08
C3orf56Q8N813 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
C3orf56Q8N813 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC15.58■□□□□ 0.08
C3orf56Q8N813 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
C3orf56Q8N813 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
C3orf56Q8N813 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
C3orf56Q8N813 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
C3orf56Q8N813 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
C3orf56Q8N813 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
C3orf56Q8N813 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC15.57■□□□□ 0.08
C3orf56Q8N813 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
C3orf56Q8N813 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.57■□□□□ 0.08
C3orf56Q8N813 RNF152P1-201ENST00000397754 604 ntBASIC15.57■□□□□ 0.08
C3orf56Q8N813 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.57■□□□□ 0.08
C3orf56Q8N813 AC009947.2-201ENST00000444014 672 ntBASIC15.57■□□□□ 0.08
C3orf56Q8N813 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.57■□□□□ 0.08
C3orf56Q8N813 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.57■□□□□ 0.08
C3orf56Q8N813 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.57■□□□□ 0.08
C3orf56Q8N813 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC15.57■□□□□ 0.08
C3orf56Q8N813 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
C3orf56Q8N813 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC15.57■□□□□ 0.08
C3orf56Q8N813 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC15.57■□□□□ 0.08
C3orf56Q8N813 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
C3orf56Q8N813 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
C3orf56Q8N813 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
C3orf56Q8N813 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
C3orf56Q8N813 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
C3orf56Q8N813 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
C3orf56Q8N813 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
C3orf56Q8N813 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
C3orf56Q8N813 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms