Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLNS1AP54105 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLNS1AP54105 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.77■□□□□ 0.76
CLNS1AP54105 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.77■□□□□ 0.76
CLNS1AP54105 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.77■□□□□ 0.76
CLNS1AP54105 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.77■□□□□ 0.76
CLNS1AP54105 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLNS1AP54105 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CLNS1AP54105 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLNS1AP54105 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.77■□□□□ 0.76
CLNS1AP54105 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.77■□□□□ 0.76
CLNS1AP54105 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLNS1AP54105 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLNS1AP54105 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.77■□□□□ 0.76
CLNS1AP54105 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLNS1AP54105 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.77■□□□□ 0.76
CLNS1AP54105 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CLNS1AP54105 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CLNS1AP54105 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CLNS1AP54105 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLNS1AP54105 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLNS1AP54105 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLNS1AP54105 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLNS1AP54105 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLNS1AP54105 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLNS1AP54105 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLNS1AP54105 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLNS1AP54105 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CLNS1AP54105 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CLNS1AP54105 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLNS1AP54105 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.76■□□□□ 0.75
CLNS1AP54105 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.76■□□□□ 0.75
CLNS1AP54105 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.76■□□□□ 0.75
CLNS1AP54105 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.76■□□□□ 0.75
CLNS1AP54105 AC012414.1-201ENST00000556676 535 ntBASIC19.76■□□□□ 0.75
CLNS1AP54105 AF213884.3-201ENST00000563833 479 ntBASIC19.76■□□□□ 0.75
CLNS1AP54105 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLNS1AP54105 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLNS1AP54105 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLNS1AP54105 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
CLNS1AP54105 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLNS1AP54105 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.76■□□□□ 0.75
CLNS1AP54105 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CLNS1AP54105 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLNS1AP54105 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLNS1AP54105 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CLNS1AP54105 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLNS1AP54105 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLNS1AP54105 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLNS1AP54105 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLNS1AP54105 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.75■□□□□ 0.75
CLNS1AP54105 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLNS1AP54105 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLNS1AP54105 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CLNS1AP54105 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLNS1AP54105 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLNS1AP54105 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.75■□□□□ 0.75
CLNS1AP54105 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.75■□□□□ 0.75
CLNS1AP54105 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.75■□□□□ 0.75
CLNS1AP54105 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLNS1AP54105 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.75■□□□□ 0.75
CLNS1AP54105 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.75■□□□□ 0.75
CLNS1AP54105 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLNS1AP54105 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.75■□□□□ 0.75
CLNS1AP54105 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLNS1AP54105 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CLNS1AP54105 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.75■□□□□ 0.75
CLNS1AP54105 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLNS1AP54105 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLNS1AP54105 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.75■□□□□ 0.75
CLNS1AP54105 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
CLNS1AP54105 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLNS1AP54105 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.74■□□□□ 0.75
CLNS1AP54105 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLNS1AP54105 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLNS1AP54105 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLNS1AP54105 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLNS1AP54105 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.74■□□□□ 0.75
CLNS1AP54105 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLNS1AP54105 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.74■□□□□ 0.75
CLNS1AP54105 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLNS1AP54105 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.74■□□□□ 0.75
CLNS1AP54105 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLNS1AP54105 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.74■□□□□ 0.75
CLNS1AP54105 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLNS1AP54105 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLNS1AP54105 AC020907.5-201ENST00000624372 1936 ntBASIC19.74■□□□□ 0.75
CLNS1AP54105 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CLNS1AP54105 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLNS1AP54105 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLNS1AP54105 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLNS1AP54105 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.74■□□□□ 0.75
CLNS1AP54105 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.74■□□□□ 0.75
CLNS1AP54105 AC011484.1-201ENST00000377652 1995 ntBASIC19.74■□□□□ 0.75
CLNS1AP54105 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CLNS1AP54105 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLNS1AP54105 PCDHB18P-201ENST00000524813 2368 ntBASIC19.73■□□□□ 0.75
CLNS1AP54105 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLNS1AP54105 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLNS1AP54105 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms