Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 AL031963.3-201ENST00000606441 850 ntBASIC18.21■□□□□ 0.51
HMGA2P52926 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.21■□□□□ 0.51
HMGA2P52926 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HMGA2P52926 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
HMGA2P52926 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGA2P52926 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
HMGA2P52926 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HMGA2P52926 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGA2P52926 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.21■□□□□ 0.5
HMGA2P52926 AC093503.3-201ENST00000624917 2352 ntBASIC18.2■□□□□ 0.5
HMGA2P52926 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGA2P52926 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGA2P52926 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGA2P52926 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
HMGA2P52926 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HMGA2P52926 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGA2P52926 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HMGA2P52926 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGA2P52926 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
HMGA2P52926 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGA2P52926 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGA2P52926 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
HMGA2P52926 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGA2P52926 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.2■□□□□ 0.5
HMGA2P52926 KRT18P61-201ENST00000585825 1298 ntBASIC18.2■□□□□ 0.5
HMGA2P52926 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.2■□□□□ 0.5
HMGA2P52926 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGA2P52926 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGA2P52926 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
HMGA2P52926 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.2■□□□□ 0.5
HMGA2P52926 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGA2P52926 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HMGA2P52926 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
HMGA2P52926 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HMGA2P52926 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGA2P52926 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGA2P52926 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGA2P52926 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGA2P52926 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HMGA2P52926 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGA2P52926 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGA2P52926 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGA2P52926 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.19■□□□□ 0.5
HMGA2P52926 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HMGA2P52926 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
HMGA2P52926 KRT8P20-201ENST00000423953 1409 ntBASIC18.19■□□□□ 0.5
HMGA2P52926 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.19■□□□□ 0.5
HMGA2P52926 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGA2P52926 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.19■□□□□ 0.5
HMGA2P52926 AC100791.3-201ENST00000617619 330 ntBASIC18.19■□□□□ 0.5
HMGA2P52926 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGA2P52926 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HMGA2P52926 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGA2P52926 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
HMGA2P52926 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.18■□□□□ 0.5
HMGA2P52926 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGA2P52926 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
HMGA2P52926 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGA2P52926 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
HMGA2P52926 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.18■□□□□ 0.5
HMGA2P52926 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGA2P52926 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGA2P52926 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGA2P52926 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
HMGA2P52926 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGA2P52926 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
HMGA2P52926 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.18■□□□□ 0.5
HMGA2P52926 AC007322.4-201ENST00000509611 723 ntBASIC18.18■□□□□ 0.5
HMGA2P52926 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.18■□□□□ 0.5
HMGA2P52926 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.18■□□□□ 0.5
HMGA2P52926 AC010536.3-201ENST00000620306 533 ntBASIC18.18■□□□□ 0.5
HMGA2P52926 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGA2P52926 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
HMGA2P52926 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.18■□□□□ 0.5
HMGA2P52926 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGA2P52926 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HMGA2P52926 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HMGA2P52926 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGA2P52926 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
HMGA2P52926 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGA2P52926 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGA2P52926 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGA2P52926 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGA2P52926 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
HMGA2P52926 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
HMGA2P52926 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMGA2P52926 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.17■□□□□ 0.5
HMGA2P52926 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGA2P52926 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMGA2P52926 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMGA2P52926 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMGA2P52926 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGA2P52926 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMGA2P52926 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
HMGA2P52926 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGA2P52926 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
HMGA2P52926 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.17■□□□□ 0.5
HMGA2P52926 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGA2P52926 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.17■□□□□ 0.5
HMGA2P52926 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms