Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.27■□□□□ 0.046e-7■■■■□ 23.1
RPS3P23396 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.53□□□□□ -0.083e-8■■■■□ 23.1
RPS3P23396 CD63-205ENST00000548117 499 ntTSL 211.41□□□□□ -0.588e-8■■■■□ 23.1
RPS3P23396 CD63-212ENST00000552067 621 ntTSL 5 BASIC11.41□□□□□ -0.588e-8■■■■□ 23.1
RPS3P23396 CD63-207ENST00000548898 727 ntTSL 2 BASIC11.41□□□□□ -0.588e-8■■■■□ 23.1
RPS3P23396 CD63-216ENST00000555199 230 ntTSL 210.59□□□□□ -0.714e-9■■■■□ 23.1
RPS3P23396 CD63-206ENST00000548160 648 ntTSL 2 BASIC8.43□□□□□ -1.068e-8■■■■□ 23.1
RPS3P23396 SERPINH1-208ENST00000526638 719 ntTSL 212.96□□□□□ -0.337e-10■■■■□ 23.1
RPS3P23396 ENO1-204ENST00000489867 732 ntTSL 1 (best)16.18■□□□□ 0.181e-49■■■■□ 23.1
RPS3P23396 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.171e-6■■■■□ 23.1
RPS3P23396 RNASE4-202ENST00000555597 1341 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.571e-8■■■■□ 23.1
RPS3P23396 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.153e-6■■■■□ 23.1
RPS3P23396 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.87■□□□□ 0.613e-6■■■■□ 23.1
RPS3P23396 SRI-205ENST00000457606 769 ntTSL 517.2■□□□□ 0.343e-6■■■■□ 23.1
RPS3P23396 SRI-204ENST00000431660 1418 ntTSL 2 BASIC8.37□□□□□ -1.073e-6■■■■□ 23.1
RPS3P23396 SRI-202ENST00000394641 653 ntTSL 2 BASIC7.67□□□□□ -1.183e-6■■■■□ 23.1
RPS3P23396 SRI-207ENST00000486860 1024 ntTSL 1 (best)6.22□□□□□ -1.413e-6■■■■□ 23.1
RPS3P23396 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.46□□□□□ -2.023e-6■■■■□ 23.1
RPS3P23396 H3F3A-202ENST00000366814 1863 ntTSL 2 BASIC10.77□□□□□ -0.694e-9■■■■□ 23.1
RPS3P23396 TTR-203ENST00000541025 956 ntTSL 26.08□□□□□ -1.444e-9■■■■□ 23.1
RPS3P23396 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.121e-6■■■■□ 23.1
RPS3P23396 CMBL-204ENST00000506821 901 ntTSL 211.57□□□□□ -0.561e-6■■■■□ 23.1
RPS3P23396 CMBL-206ENST00000511963 796 ntTSL 39.09□□□□□ -0.951e-6■■■■□ 23.1
RPS3P23396 CMBL-205ENST00000510532 701 ntTSL 37.11□□□□□ -1.271e-6■■■■□ 23.1
RPS3P23396 NUSAP1-209ENST00000559659 529 ntTSL 28.08□□□□□ -1.126e-7■■■■□ 23.1
RPS3P23396 NUSAP1-206ENST00000558582 546 ntTSL 58.05□□□□□ -1.126e-7■■■■□ 23.1
RPS3P23396 NUSAP1-207ENST00000559046 580 ntTSL 58.04□□□□□ -1.126e-7■■■■□ 23.1
RPS3P23396 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.211e-6■■■■□ 23.1
RPS3P23396 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.281e-6■■■■□ 23.1
RPS3P23396 ECH1-209ENST00000597805 135 ntTSL 57.23□□□□□ -1.257e-7■■■■□ 23
RPS3P23396 ECH1-208ENST00000597205 169 ntTSL 55.56□□□□□ -1.527e-7■■■■□ 23
RPS3P23396 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.511e-10■■■■□ 23
RPS3P23396 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.241e-10■■■■□ 23
RPS3P23396 RTN3-211ENST00000542238 735 ntTSL 314.66□□□□□ -0.061e-9■■■■□ 23
RPS3P23396 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.15e-7■■■■□ 23
RPS3P23396 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.415e-7■■■■□ 23
RPS3P23396 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC30.82■■■□□ 2.538e-7■■■■□ 23
RPS3P23396 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC25.86■■□□□ 1.738e-7■■■■□ 23
RPS3P23396 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.628e-7■■■■□ 23
RPS3P23396 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.68e-7■■■■□ 23
RPS3P23396 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.548e-7■■■■□ 23
RPS3P23396 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC24.39■■□□□ 1.498e-7■■■■□ 23
RPS3P23396 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.31■■□□□ 1.328e-7■■■■□ 23
RPS3P23396 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.67■■□□□ 1.228e-7■■■■□ 23
RPS3P23396 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.858e-7■■■■□ 23
RPS3P23396 RTN3-212ENST00000543123 712 ntTSL 212.62□□□□□ -0.395e-10■■■■□ 23
RPS3P23396 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.134e-8■■■■□ 23
RPS3P23396 ATP5G1-205ENST00000504591 401 ntTSL 210.29□□□□□ -0.761e-11■■■■□ 23
RPS3P23396 ATP5G1-209ENST00000514808 359 ntTSL 2 BASIC9.76□□□□□ -0.851e-11■■■■□ 23
RPS3P23396 COL4A5-201ENST00000328300 6483 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.624e-6■■■■□ 23
RPS3P23396 COL4A5-202ENST00000361603 6469 ntAPPRIS P3 TSL 2 BASIC11.15□□□□□ -0.624e-6■■■■□ 23
RPS3P23396 MAD2L1-203ENST00000504707 764 ntTSL 215.73■□□□□ 0.114e-7■■■■□ 23
RPS3P23396 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.597e-7■■■■□ 23
RPS3P23396 PPT1-209ENST00000530076 1872 ntTSL 2 BASIC10.02□□□□□ -0.815e-8■■■■□ 23
RPS3P23396 PPT1-201ENST00000372775 563 ntTSL 36.44□□□□□ -1.385e-8■■■■□ 23
RPS3P23396 HMBS-220ENST00000544360 695 ntTSL 312.23□□□□□ -0.458e-7■■■■□ 23
RPS3P23396 PTTG1-203ENST00000517480 684 ntTSL 58.84□□□□□ -0.991e-7■■■■□ 23
RPS3P23396 ERMP1-205ENST00000487088 2799 ntTSL 520.7■□□□□ 0.97e-7■■■■□ 23
RPS3P23396 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.827e-7■■■■□ 23
RPS3P23396 ERMP1-206ENST00000489219 3293 ntTSL 1 (best)16.88■□□□□ 0.297e-7■■■■□ 23
RPS3P23396 ERMP1-203ENST00000462592 3554 ntTSL 215.95■□□□□ 0.147e-7■■■■□ 23
RPS3P23396 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.173e-7■■■■□ 23
RPS3P23396 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.813e-7■■■■□ 23
RPS3P23396 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.643e-7■■■■□ 23
RPS3P23396 TMBIM6-214ENST00000548809 469 ntTSL 216.25■□□□□ 0.194e-15■■■■□ 23
RPS3P23396 TMBIM6-213ENST00000548713 551 ntTSL 46.93□□□□□ -1.34e-15■■■■□ 23
RPS3P23396 TMBIM6-215ENST00000548894 373 ntTSL 44.64□□□□□ -1.674e-15■■■■□ 23
RPS3P23396 SERPINH1-207ENST00000526397 882 ntTSL 516.89■□□□□ 0.292e-8■■■■□ 23
RPS3P23396 MIR6513-201ENST00000621188 64 ntBASIC0.41□□□□□ -2.344e-11■■■■□ 23
RPS3P23396 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.09■□□□□ 0.335e-7■■■■□ 22.9
RPS3P23396 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.045e-7■■■■□ 22.9
RPS3P23396 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.015e-7■■■■□ 22.9
RPS3P23396 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.86□□□□□ -1.475e-7■■■■□ 22.9
RPS3P23396 NAGLU-204ENST00000591587 1493 ntTSL 515.42■□□□□ 0.062e-7■■■■□ 22.9
RPS3P23396 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.32■□□□□ 0.042e-7■■■■□ 22.9
RPS3P23396 PTGES2-203ENST00000449878 803 ntTSL 523.58■■□□□ 1.373e-6■■■■□ 22.9
RPS3P23396 PTGES2-209ENST00000485510 784 ntTSL 322.81■■□□□ 1.243e-6■■■■□ 22.9
RPS3P23396 PTGES2-204ENST00000474124 873 ntTSL 522.81■■□□□ 1.243e-6■■■■□ 22.9
RPS3P23396 PTGES2-207ENST00000483625 898 ntTSL 522.49■■□□□ 1.193e-6■■■■□ 22.9
RPS3P23396 PTGES2-212ENST00000496594 2103 ntTSL 522.03■■□□□ 1.123e-6■■■■□ 22.9
RPS3P23396 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.13e-6■■■■□ 22.9
RPS3P23396 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.1■□□□□ 0.493e-6■■■■□ 22.9
RPS3P23396 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.4■□□□□ 0.383e-6■■■■□ 22.9
RPS3P23396 PTGES2-206ENST00000476748 699 ntTSL 216.77■□□□□ 0.283e-6■■■■□ 22.9
RPS3P23396 PTGES2-213ENST00000497109 684 ntTSL 515.4■□□□□ 0.063e-6■■■■□ 22.9
RPS3P23396 PTGES2-210ENST00000487063 638 ntTSL 314.64□□□□□ -0.073e-6■■■■□ 22.9
RPS3P23396 PTGES2-208ENST00000485237 258 ntTSL 312.21□□□□□ -0.453e-6■■■■□ 22.9
RPS3P23396 UQCR11-205ENST00000593264 409 ntTSL 318.65■□□□□ 0.581e-10■■■■□ 22.9
RPS3P23396 TPP1-202ENST00000428886 841 ntTSL 212.79□□□□□ -0.369e-11■■■■□ 22.9
RPS3P23396 TPP1-216ENST00000534644 636 ntTSL 410.07□□□□□ -0.89e-11■■■■□ 22.9
RPS3P23396 TPP1-208ENST00000528571 561 ntTSL 47.57□□□□□ -1.29e-11■■■■□ 22.9
RPS3P23396 LDHB-206ENST00000470985 678 ntTSL 1 (best)5.67□□□□□ -1.51e-9■■■■□ 22.9
RPS3P23396 SERPINH1-211ENST00000529643 660 ntTSL 319.98■□□□□ 0.793e-8■■■■□ 22.9
RPS3P23396 DDB1-222ENST00000543627 540 ntTSL 510.73□□□□□ -0.699e-7■■■■□ 22.9
RPS3P23396 CCT2-210ENST00000550638 683 ntTSL 29.82□□□□□ -0.842e-7■■■■□ 22.9
RPS3P23396 CCT2-205ENST00000546859 595 ntTSL 28.87□□□□□ -0.992e-7■■■■□ 22.9
RPS3P23396 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.05■□□□□ 0.325e-7■■■■□ 22.9
RPS3P23396 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.25e-7■■■■□ 22.9
RPS3P23396 RPS27A-204ENST00000449323 422 ntTSL 33.87□□□□□ -1.793e-12■■■■□ 22.9
RPS3P23396 RPS27A-208ENST00000478196 580 ntTSL 23.87□□□□□ -1.793e-12■■■■□ 22.9
Retrieved 100 of 24,271 protein–RNA pairs in 209.3 ms