RNA–Protein interactions for RNA: ENST00000621973.1

DDX1-208, Transcript of DEAD-box helicase 1, humanhuman

TSL 5 BASIC

Gene DDX1, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-208ENST00000621973 CHIC1Q5VXU3 224 aa18.11■□□□□ 0.49
DDX1-208ENST00000621973 AEBP2Q6ZN18 517 aaPredicted RBP17.74■□□□□ 0.43
DDX1-208ENST00000621973 PHF23Q9BUL5 403 aaPredicted RBP16.05■□□□□ 0.16
DDX1-208ENST00000621973 PLPPR3Q6T4P5 718 aa15.07■□□□□ 0
DDX1-208ENST00000621973 SENP3Q9H4L4 574 aaPredicted RBP14.88□□□□□ -0.03
DDX1-208ENST00000621973 SLC24A1O60721 1099 aa14.19□□□□□ -0.14
DDX1-208ENST00000621973 EHMT2Q96KQ7 1210 aa14.15□□□□□ -0.14
DDX1-208ENST00000621973 ADRA2BP18089 450 aa14.12□□□□□ -0.15
DDX1-208ENST00000621973 KCNA4P22459 653 aa14.05□□□□□ -0.16
DDX1-208ENST00000621973 PPP6R1Q9UPN7 881 aa13.89□□□□□ -0.19
DDX1-208ENST00000621973 FOXD1Q16676 465 aa13.74□□□□□ -0.21
DDX1-208ENST00000621973 CSRNP3Q8WYN3 585 aa13.55□□□□□ -0.24
DDX1-208ENST00000621973 SLC4A1APQ9BWU0 796 aaKnown RBP13.49□□□□□ -0.25
DDX1-208ENST00000621973 PPP4R3CPQ6ZMV5 832 aa13.38□□□□□ -0.27
DDX1-208ENST00000621973 RTN4Q9NQC3 1192 aaKnown RBP13.3□□□□□ -0.28
DDX1-208ENST00000621973 NCBP3Q53F19 620 aaKnown RBP13.24□□□□□ -0.29
DDX1-208ENST00000621973 PIAS4Q8N2W9 510 aaPredicted RBP13.14□□□□□ -0.31
DDX1-208ENST00000621973 NPM3O75607 178 aaKnown RBP13.1□□□□□ -0.31
DDX1-208ENST00000621973 AMER1Q5JTC6 1135 aaPredicted RBP13.02□□□□□ -0.33
DDX1-208ENST00000621973 ZBTB22O15209 634 aa12.97□□□□□ -0.33
DDX1-208ENST00000621973 CNKSR2Q8WXI2 1034 aa12.81□□□□□ -0.36
DDX1-208ENST00000621973 SCAF1Q9H7N4 1312 aaKnown RBP12.66□□□□□ -0.38
DDX1-208ENST00000621973 FOXD4L1Q9NU39 408 aa12.66□□□□□ -0.38
DDX1-208ENST00000621973 DNAJC5BQ9UF47 199 aa12.6□□□□□ -0.39
DDX1-208ENST00000621973 NISCHQ9Y2I1 1504 aa12.54□□□□□ -0.4
DDX1-208ENST00000621973 PRKCSHP14314 528 aaPredicted RBP12.44□□□□□ -0.42
DDX1-208ENST00000621973 MAPK8IP2Q13387 824 aaPredicted RBP12.37□□□□□ -0.43
DDX1-208ENST00000621973 RNF216Q9NWF9 866 aaPredicted RBP12.37□□□□□ -0.43
DDX1-208ENST00000621973 DAXXQ9UER7 740 aaPredicted RBP12.36□□□□□ -0.43
DDX1-208ENST00000621973 MSH5O43196 834 aa12.3□□□□□ -0.44
DDX1-208ENST00000621973 SLC4A2P04920 1241 aa12.18□□□□□ -0.46
DDX1-208ENST00000621973 FKBP8Q14318 412 aa12.18□□□□□ -0.46
DDX1-208ENST00000621973 ATXN8OSP0DMR3 200 aa12.13□□□□□ -0.47
DDX1-208ENST00000621973 TAOK2Q9UL54 1235 aa12.12□□□□□ -0.47
DDX1-208ENST00000621973 HOXD11P31277 338 aaPredicted RBP12.11□□□□□ -0.47
DDX1-208ENST00000621973 MYCNP04198 464 aaPredicted RBP12.06□□□□□ -0.48
DDX1-208ENST00000621973 PLCB2Q00722 1185 aa12.02□□□□□ -0.48
DDX1-208ENST00000621973 TIMELESSQ9UNS1 1208 aa12.02□□□□□ -0.48
DDX1-208ENST00000621973 DMRT2Q9Y5R5 561 aa12.02□□□□□ -0.48
DDX1-208ENST00000621973 BCANQ96GW7 911 aa12.02□□□□□ -0.49
DDX1-208ENST00000621973 ARXQ96QS3 562 aa11.92□□□□□ -0.5
DDX1-208ENST00000621973 TPRNQ4KMQ1 711 aa11.92□□□□□ -0.5
DDX1-208ENST00000621973 HAP1P54257 671 aaPredicted RBP11.86□□□□□ -0.51
DDX1-208ENST00000621973 TULP1O00294 542 aaPredicted RBP11.85□□□□□ -0.51
DDX1-208ENST00000621973 ATF5Q9Y2D1 282 aaPredicted RBP11.72□□□□□ -0.53
DDX1-208ENST00000621973 VSIG10Q8N0Z9 540 aa11.6□□□□□ -0.55
DDX1-208ENST00000621973 HOMEZQ8IX15 550 aa11.58□□□□□ -0.56
DDX1-208ENST00000621973 GTF3C3Q9Y5Q9 886 aa11.57□□□□□ -0.56
DDX1-208ENST00000621973 SAMD1Q6SPF0 538 aaPredicted RBP11.55□□□□□ -0.56
DDX1-208ENST00000621973 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.54□□□□□ -0.56
DDX1-208ENST00000621973 HNRNPUL2Q1KMD3 747 aaKnown RBP11.54□□□□□ -0.56
DDX1-208ENST00000621973 KDM2AQ9Y2K7 1162 aa11.54□□□□□ -0.56
DDX1-208ENST00000621973 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.5□□□□□ -0.571e-6■■□□□ 12.1
DDX1-208ENST00000621973 FBXO3Q9UK99 471 aa11.49□□□□□ -0.57
DDX1-208ENST00000621973 U3KPZ7 1027 aaPredicted RBP11.45□□□□□ -0.58
DDX1-208ENST00000621973 FBLN2P98095 1184 aa11.45□□□□□ -0.58
DDX1-208ENST00000621973 DCAF8L1A6NGE4 600 aa11.43□□□□□ -0.58
DDX1-208ENST00000621973 ZNF219Q9P2Y4 722 aaPredicted RBP11.4□□□□□ -0.59
DDX1-208ENST00000621973 DCAF8L2P0C7V8 631 aa11.37□□□□□ -0.59
DDX1-208ENST00000621973 SPDYE4A6NLX3 237 aa11.37□□□□□ -0.59
DDX1-208ENST00000621973 TMEM132AQ24JP5 1023 aa11.34□□□□□ -0.59
DDX1-208ENST00000621973 VASPP50552 380 aaPredicted RBP11.34□□□□□ -0.59
DDX1-208ENST00000621973 PROM2Q8N271 834 aa11.33□□□□□ -0.6
DDX1-208ENST00000621973 RANGAP1P46060 587 aaPredicted RBP11.32□□□□□ -0.6
DDX1-208ENST00000621973 PODXL2Q9NZ53 605 aa11.3□□□□□ -0.6
DDX1-208ENST00000621973 ERICH6Q7L0X2 663 aa11.28□□□□□ -0.6
DDX1-208ENST00000621973 IFNLR1Q8IU57 520 aaPredicted RBP11.27□□□□□ -0.6
DDX1-208ENST00000621973 MKRN4PQ13434 485 aaPredicted RBP11.26□□□□□ -0.61
DDX1-208ENST00000621973 PKD2Q13563 968 aa11.22□□□□□ -0.61
DDX1-208ENST00000621973 C14orf37Q86TY3 774 aa11.21□□□□□ -0.61
DDX1-208ENST00000621973 APLP2Q06481 763 aa11.2□□□□□ -0.62
DDX1-208ENST00000621973 KLHL34Q8N239 644 aa11.16□□□□□ -0.62
DDX1-208ENST00000621973 PAXIP1Q6ZW49 1069 aaPredicted RBP11.11□□□□□ -0.63
DDX1-208ENST00000621973 CFAP44Q96MT7 982 aa11.08□□□□□ -0.64
DDX1-208ENST00000621973 TSHZ2Q9NRE2 1034 aa11.05□□□□□ -0.64
DDX1-208ENST00000621973 BBXQ8WY36 941 aaPredicted RBP11.04□□□□□ -0.64
DDX1-208ENST00000621973 NPM1P06748 294 aaKnown RBP eCLIP11.04□□□□□ -0.64
DDX1-208ENST00000621973 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.04□□□□□ -0.64
DDX1-208ENST00000621973 SUPT5HO00267 1087 aaKnown RBP11.03□□□□□ -0.64
DDX1-208ENST00000621973 NBR1Q14596 966 aa11□□□□□ -0.65
DDX1-208ENST00000621973 NPM2Q86SE8 214 aaKnown RBP10.97□□□□□ -0.65
DDX1-208ENST00000621973 ECM2O94769 699 aaPredicted RBP10.96□□□□□ -0.66
DDX1-208ENST00000621973 POLA2Q14181 598 aa10.96□□□□□ -0.66
DDX1-208ENST00000621973 SPOCK2Q92563 424 aa10.95□□□□□ -0.66
DDX1-208ENST00000621973 TRIM26Q12899 539 aaPredicted RBP10.93□□□□□ -0.66
DDX1-208ENST00000621973 TRHP20396 242 aaPredicted RBP10.93□□□□□ -0.66
DDX1-208ENST00000621973 UBTFP17480 764 aaKnown RBP10.9□□□□□ -0.66
DDX1-208ENST00000621973 SPINK5Q9NQ38 1064 aaPredicted RBP10.89□□□□□ -0.67
DDX1-208ENST00000621973 RGL2O15211 777 aa10.86□□□□□ -0.67
DDX1-208ENST00000621973 SPRYD3Q8NCJ5 442 aa10.84□□□□□ -0.67
DDX1-208ENST00000621973 DNAJC5Q9H3Z4 198 aa10.84□□□□□ -0.67
DDX1-208ENST00000621973 HRCP23327 699 aa10.82□□□□□ -0.68
DDX1-208ENST00000621973 ZBTB12Q9Y330 459 aaPredicted RBP10.8□□□□□ -0.68
DDX1-208ENST00000621973 STAG3Q9UJ98 1225 aa10.78□□□□□ -0.68
DDX1-208ENST00000621973 CAPN15O75808 1086 aa10.77□□□□□ -0.69
DDX1-208ENST00000621973 PLCD3Q8N3E9 789 aa10.75□□□□□ -0.69
DDX1-208ENST00000621973 CCDC180Q9P1Z9 1646 aa10.73□□□□□ -0.69
DDX1-208ENST00000621973 CHGAP10645 457 aaKnown RBP10.71□□□□□ -0.69
DDX1-208ENST00000621973 PELP1Q8IZL8 1130 aaKnown RBP10.7□□□□□ -0.7
DDX1-208ENST00000621973 ZNF692Q9BU19 519 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms