Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN3P20807 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN3P20807 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN3P20807 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN3P20807 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN3P20807 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN3P20807 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.15■□□□□ 0.66
CAPN3P20807 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.15■□□□□ 0.66
CAPN3P20807 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.15■□□□□ 0.66
CAPN3P20807 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.15■□□□□ 0.66
CAPN3P20807 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CAPN3P20807 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.15■□□□□ 0.66
CAPN3P20807 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
CAPN3P20807 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN3P20807 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN3P20807 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN3P20807 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.15■□□□□ 0.66
CAPN3P20807 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN3P20807 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.15■□□□□ 0.66
CAPN3P20807 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
CAPN3P20807 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CAPN3P20807 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CAPN3P20807 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.66
CAPN3P20807 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CAPN3P20807 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CAPN3P20807 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN3P20807 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN3P20807 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.14■□□□□ 0.65
CAPN3P20807 KRT19P1-201ENST00000405746 1186 ntBASIC19.14■□□□□ 0.65
CAPN3P20807 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CAPN3P20807 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.14■□□□□ 0.65
CAPN3P20807 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.14■□□□□ 0.65
CAPN3P20807 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.14■□□□□ 0.65
CAPN3P20807 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.14■□□□□ 0.65
CAPN3P20807 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN3P20807 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN3P20807 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN3P20807 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN3P20807 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN3P20807 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN3P20807 AC004408.2-201ENST00000623613 2777 ntBASIC19.14■□□□□ 0.65
CAPN3P20807 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN3P20807 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.14■□□□□ 0.65
CAPN3P20807 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.13■□□□□ 0.65
CAPN3P20807 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN3P20807 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN3P20807 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.13■□□□□ 0.65
CAPN3P20807 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN3P20807 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN3P20807 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN3P20807 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.13■□□□□ 0.65
CAPN3P20807 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN3P20807 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.13■□□□□ 0.65
CAPN3P20807 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.13■□□□□ 0.65
CAPN3P20807 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN3P20807 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN3P20807 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN3P20807 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN3P20807 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.13■□□□□ 0.65
CAPN3P20807 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN3P20807 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.13■□□□□ 0.65
CAPN3P20807 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CAPN3P20807 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN3P20807 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CAPN3P20807 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
CAPN3P20807 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN3P20807 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.12■□□□□ 0.65
CAPN3P20807 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN3P20807 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN3P20807 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN3P20807 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.12■□□□□ 0.65
CAPN3P20807 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.12■□□□□ 0.65
CAPN3P20807 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.12■□□□□ 0.65
CAPN3P20807 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.12■□□□□ 0.65
CAPN3P20807 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN3P20807 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN3P20807 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN3P20807 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.12■□□□□ 0.65
CAPN3P20807 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.12■□□□□ 0.65
CAPN3P20807 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.12■□□□□ 0.65
CAPN3P20807 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.12■□□□□ 0.65
CAPN3P20807 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.12■□□□□ 0.65
CAPN3P20807 SLC7A5P1-201ENST00000568957 537 ntBASIC19.12■□□□□ 0.65
CAPN3P20807 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN3P20807 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.12■□□□□ 0.65
CAPN3P20807 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.12■□□□□ 0.65
CAPN3P20807 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN3P20807 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CAPN3P20807 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN3P20807 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.12■□□□□ 0.65
CAPN3P20807 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN3P20807 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.12■□□□□ 0.65
CAPN3P20807 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN3P20807 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN3P20807 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN3P20807 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CAPN3P20807 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN3P20807 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN3P20807 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.11■□□□□ 0.65
CAPN3P20807 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms