Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXD2O60548 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FOXD2O60548 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.05■□□□□ 0.8
FOXD2O60548 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FOXD2O60548 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
FOXD2O60548 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXD2O60548 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXD2O60548 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
FOXD2O60548 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FOXD2O60548 TERF1P1-201ENST00000311003 1181 ntBASIC20.04■□□□□ 0.8
FOXD2O60548 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
FOXD2O60548 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXD2O60548 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FOXD2O60548 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FOXD2O60548 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.04■□□□□ 0.8
FOXD2O60548 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.04■□□□□ 0.8
FOXD2O60548 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.04■□□□□ 0.8
FOXD2O60548 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
FOXD2O60548 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FOXD2O60548 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.04■□□□□ 0.8
FOXD2O60548 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXD2O60548 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXD2O60548 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FOXD2O60548 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXD2O60548 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
FOXD2O60548 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FOXD2O60548 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.04■□□□□ 0.8
FOXD2O60548 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.04■□□□□ 0.8
FOXD2O60548 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.04■□□□□ 0.8
FOXD2O60548 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXD2O60548 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXD2O60548 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FOXD2O60548 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.03■□□□□ 0.8
FOXD2O60548 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FOXD2O60548 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FOXD2O60548 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.03■□□□□ 0.8
FOXD2O60548 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.03■□□□□ 0.8
FOXD2O60548 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXD2O60548 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
FOXD2O60548 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FOXD2O60548 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.03■□□□□ 0.8
FOXD2O60548 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.03■□□□□ 0.8
FOXD2O60548 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXD2O60548 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXD2O60548 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.03■□□□□ 0.8
FOXD2O60548 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.03■□□□□ 0.8
FOXD2O60548 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.03■□□□□ 0.8
FOXD2O60548 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXD2O60548 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
FOXD2O60548 AF106564.1-201ENST00000607058 2553 ntBASIC20.02■□□□□ 0.8
FOXD2O60548 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXD2O60548 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.02■□□□□ 0.8
FOXD2O60548 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXD2O60548 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
FOXD2O60548 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FOXD2O60548 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXD2O60548 FAM197Y1-201ENST00000421178 764 ntBASIC20.02■□□□□ 0.8
FOXD2O60548 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.02■□□□□ 0.8
FOXD2O60548 DUX4L26-201ENST00000489078 1255 ntBASIC20.02■□□□□ 0.8
FOXD2O60548 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.02■□□□□ 0.8
FOXD2O60548 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FOXD2O60548 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.02■□□□□ 0.8
FOXD2O60548 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.02■□□□□ 0.8
FOXD2O60548 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.02■□□□□ 0.8
FOXD2O60548 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
FOXD2O60548 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FOXD2O60548 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
FOXD2O60548 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.02■□□□□ 0.8
FOXD2O60548 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXD2O60548 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.02■□□□□ 0.8
FOXD2O60548 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXD2O60548 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
FOXD2O60548 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
FOXD2O60548 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
FOXD2O60548 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXD2O60548 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXD2O60548 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXD2O60548 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
FOXD2O60548 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
FOXD2O60548 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXD2O60548 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXD2O60548 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
FOXD2O60548 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.01■□□□□ 0.79
FOXD2O60548 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.01■□□□□ 0.79
FOXD2O60548 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.01■□□□□ 0.79
FOXD2O60548 NTF6B-201ENST00000591913 560 ntBASIC20.01■□□□□ 0.79
FOXD2O60548 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
FOXD2O60548 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.01■□□□□ 0.79
FOXD2O60548 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FOXD2O60548 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FOXD2O60548 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXD2O60548 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXD2O60548 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FOXD2O60548 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
FOXD2O60548 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXD2O60548 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FOXD2O60548 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXD2O60548 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20■□□□□ 0.79
FOXD2O60548 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20■□□□□ 0.79
FOXD2O60548 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms