Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 AC104187.1-201ENST00000607510 612 ntBASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 AL358852.1-201ENST00000623174 1268 ntBASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 NME4-202ENST00000382940 766 ntTSL 3 BASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 DUX4L2-201ENST00000561772 1275 ntBASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 AL031432.3-201ENST00000607698 485 ntBASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 AC110285.6-201ENST00000617652 491 ntBASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 DUX4L6-201ENST00000626483 1275 ntBASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 DUX4L1-201ENST00000627662 1275 ntBASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 DUX4L8-201ENST00000629013 1275 ntBASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 DUX4L3-201ENST00000630187 1275 ntBASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 DUX4L7-201ENST00000630678 1275 ntBASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 DUX4L5-201ENST00000630834 1275 ntBASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV8-1A0A0A6YYK1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-1A0A0A6YYK1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
TRAV8-1A0A0A6YYK1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-1A0A0A6YYK1 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-1A0A0A6YYK1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-1A0A0A6YYK1 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-1A0A0A6YYK1 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-1A0A0A6YYK1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-1A0A0A6YYK1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-1A0A0A6YYK1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-1A0A0A6YYK1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV8-1A0A0A6YYK1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV8-1A0A0A6YYK1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
TRAV8-1A0A0A6YYK1 IRS3P-201ENST00000223076 1006 ntBASIC15.11■□□□□ 0.01
TRAV8-1A0A0A6YYK1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TRAV8-1A0A0A6YYK1 AC091799.1-201ENST00000422823 811 ntBASIC15.11■□□□□ 0.01
TRAV8-1A0A0A6YYK1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC15.11■□□□□ 0.01
TRAV8-1A0A0A6YYK1 AC007322.3-201ENST00000426526 701 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms