Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PCDHGA2Q9Y5H1 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
PCDHGA2Q9Y5H1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
PCDHGA2Q9Y5H1 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
PCDHGA2Q9Y5H1 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
PCDHGA2Q9Y5H1 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PCDHGA2Q9Y5H1 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDHGA2Q9Y5H1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.5■■□□□ 1.83
PCDHGA2Q9Y5H1 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDHGA2Q9Y5H1 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.5■■□□□ 1.83
PCDHGA2Q9Y5H1 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.5■■□□□ 1.83
PCDHGA2Q9Y5H1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
PCDHGA2Q9Y5H1 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PCDHGA2Q9Y5H1 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.48■■□□□ 1.83
PCDHGA2Q9Y5H1 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
PCDHGA2Q9Y5H1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
PCDHGA2Q9Y5H1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
PCDHGA2Q9Y5H1 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PCDHGA2Q9Y5H1 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.47■■□□□ 1.83
PCDHGA2Q9Y5H1 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.46■■□□□ 1.83
PCDHGA2Q9Y5H1 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.46■■□□□ 1.83
PCDHGA2Q9Y5H1 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PCDHGA2Q9Y5H1 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.45■■□□□ 1.82
PCDHGA2Q9Y5H1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
PCDHGA2Q9Y5H1 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PCDHGA2Q9Y5H1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
PCDHGA2Q9Y5H1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.44■■□□□ 1.82
PCDHGA2Q9Y5H1 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PCDHGA2Q9Y5H1 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PCDHGA2Q9Y5H1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.43■■□□□ 1.82
PCDHGA2Q9Y5H1 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PCDHGA2Q9Y5H1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.39■■□□□ 1.82
PCDHGA2Q9Y5H1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.39■■□□□ 1.82
PCDHGA2Q9Y5H1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.82
PCDHGA2Q9Y5H1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PCDHGA2Q9Y5H1 AC022413.1-201ENST00000624602 984 ntBASIC26.39■■□□□ 1.82
PCDHGA2Q9Y5H1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PCDHGA2Q9Y5H1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PCDHGA2Q9Y5H1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
PCDHGA2Q9Y5H1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.37■■□□□ 1.81
PCDHGA2Q9Y5H1 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHGA2Q9Y5H1 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHGA2Q9Y5H1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.37■■□□□ 1.81
PCDHGA2Q9Y5H1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHGA2Q9Y5H1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
PCDHGA2Q9Y5H1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHGA2Q9Y5H1 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHGA2Q9Y5H1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHGA2Q9Y5H1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHGA2Q9Y5H1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.34■■□□□ 1.81
PCDHGA2Q9Y5H1 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHGA2Q9Y5H1 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHGA2Q9Y5H1 AC018358.1-201ENST00000631079 1402 ntBASIC26.33■■□□□ 1.81
PCDHGA2Q9Y5H1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
PCDHGA2Q9Y5H1 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.32■■□□□ 1.8
PCDHGA2Q9Y5H1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
PCDHGA2Q9Y5H1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.31■■□□□ 1.8
PCDHGA2Q9Y5H1 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHGA2Q9Y5H1 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.31■■□□□ 1.8
PCDHGA2Q9Y5H1 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHGA2Q9Y5H1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.3■■□□□ 1.8
PCDHGA2Q9Y5H1 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHGA2Q9Y5H1 AL033527.3-201ENST00000566366 1196 ntBASIC26.29■■□□□ 1.8
PCDHGA2Q9Y5H1 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHGA2Q9Y5H1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHGA2Q9Y5H1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHGA2Q9Y5H1 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
PCDHGA2Q9Y5H1 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHGA2Q9Y5H1 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
PCDHGA2Q9Y5H1 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHGA2Q9Y5H1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHGA2Q9Y5H1 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.26■■□□□ 1.79
PCDHGA2Q9Y5H1 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHGA2Q9Y5H1 AC008813.1-201ENST00000536597 885 ntBASIC26.26■■□□□ 1.79
PCDHGA2Q9Y5H1 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.26■■□□□ 1.79
PCDHGA2Q9Y5H1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.25■■□□□ 1.79
PCDHGA2Q9Y5H1 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.25■■□□□ 1.79
PCDHGA2Q9Y5H1 LINC00273-201ENST00000539813 1452 ntBASIC26.24■■□□□ 1.79
PCDHGA2Q9Y5H1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHGA2Q9Y5H1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHGA2Q9Y5H1 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.24■■□□□ 1.79
PCDHGA2Q9Y5H1 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHGA2Q9Y5H1 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHGA2Q9Y5H1 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHGA2Q9Y5H1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHGA2Q9Y5H1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC26.23■■□□□ 1.79
PCDHGA2Q9Y5H1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.23■■□□□ 1.79
PCDHGA2Q9Y5H1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.23■■□□□ 1.79
PCDHGA2Q9Y5H1 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
PCDHGA2Q9Y5H1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26.22■■□□□ 1.79
PCDHGA2Q9Y5H1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.21■■□□□ 1.79
PCDHGA2Q9Y5H1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHGA2Q9Y5H1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHGA2Q9Y5H1 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PCDHGA2Q9Y5H1 AC120057.4-201ENST00000624722 1615 ntBASIC26.2■■□□□ 1.78
PCDHGA2Q9Y5H1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHGA2Q9Y5H1 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
PCDHGA2Q9Y5H1 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHGA2Q9Y5H1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHGA2Q9Y5H1 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms