Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
COMMD9Q9P000 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COMMD9Q9P000 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COMMD9Q9P000 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
COMMD9Q9P000 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COMMD9Q9P000 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
COMMD9Q9P000 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
COMMD9Q9P000 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.84■■□□□ 1.09
COMMD9Q9P000 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
COMMD9Q9P000 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC21.84■■□□□ 1.09
COMMD9Q9P000 AP002365.1-201ENST00000603448 772 ntBASIC21.84■■□□□ 1.09
COMMD9Q9P000 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COMMD9Q9P000 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
COMMD9Q9P000 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
COMMD9Q9P000 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC21.83■■□□□ 1.09
COMMD9Q9P000 DRD5P2-201ENST00000421395 2012 ntBASIC21.82■■□□□ 1.08
COMMD9Q9P000 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
COMMD9Q9P000 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COMMD9Q9P000 AL135925.1-201ENST00000605920 1701 ntBASIC21.82■■□□□ 1.08
COMMD9Q9P000 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
COMMD9Q9P000 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COMMD9Q9P000 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
COMMD9Q9P000 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COMMD9Q9P000 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.8■■□□□ 1.08
COMMD9Q9P000 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
COMMD9Q9P000 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
COMMD9Q9P000 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.79■■□□□ 1.08
COMMD9Q9P000 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
COMMD9Q9P000 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
COMMD9Q9P000 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COMMD9Q9P000 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
COMMD9Q9P000 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
COMMD9Q9P000 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COMMD9Q9P000 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COMMD9Q9P000 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COMMD9Q9P000 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
COMMD9Q9P000 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
COMMD9Q9P000 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.77■■□□□ 1.08
COMMD9Q9P000 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
COMMD9Q9P000 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COMMD9Q9P000 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
COMMD9Q9P000 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COMMD9Q9P000 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
COMMD9Q9P000 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
COMMD9Q9P000 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
COMMD9Q9P000 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
COMMD9Q9P000 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COMMD9Q9P000 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.73■■□□□ 1.07
COMMD9Q9P000 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COMMD9Q9P000 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COMMD9Q9P000 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COMMD9Q9P000 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COMMD9Q9P000 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COMMD9Q9P000 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.72■■□□□ 1.07
COMMD9Q9P000 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COMMD9Q9P000 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COMMD9Q9P000 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COMMD9Q9P000 AL139393.2-201ENST00000608721 2025 ntBASIC21.71■■□□□ 1.07
COMMD9Q9P000 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COMMD9Q9P000 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
COMMD9Q9P000 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COMMD9Q9P000 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.67■■□□□ 1.06
COMMD9Q9P000 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
COMMD9Q9P000 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
COMMD9Q9P000 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COMMD9Q9P000 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
COMMD9Q9P000 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
COMMD9Q9P000 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.67■■□□□ 1.06
COMMD9Q9P000 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COMMD9Q9P000 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COMMD9Q9P000 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COMMD9Q9P000 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COMMD9Q9P000 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
COMMD9Q9P000 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COMMD9Q9P000 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COMMD9Q9P000 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
COMMD9Q9P000 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
COMMD9Q9P000 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
COMMD9Q9P000 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COMMD9Q9P000 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
COMMD9Q9P000 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.64■■□□□ 1.05
COMMD9Q9P000 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
COMMD9Q9P000 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.63■■□□□ 1.05
COMMD9Q9P000 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
COMMD9Q9P000 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COMMD9Q9P000 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
COMMD9Q9P000 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
COMMD9Q9P000 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.62■■□□□ 1.05
COMMD9Q9P000 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.61■■□□□ 1.05
COMMD9Q9P000 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
COMMD9Q9P000 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.61■■□□□ 1.05
COMMD9Q9P000 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COMMD9Q9P000 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COMMD9Q9P000 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COMMD9Q9P000 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COMMD9Q9P000 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21.6■■□□□ 1.05
COMMD9Q9P000 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC21.6■■□□□ 1.05
COMMD9Q9P000 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.6■■□□□ 1.05
COMMD9Q9P000 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.59■■□□□ 1.05
COMMD9Q9P000 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms