Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
LRTM1Q9HBL6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
LRTM1Q9HBL6 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
LRTM1Q9HBL6 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC24.88■■□□□ 1.57
LRTM1Q9HBL6 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC24.87■■□□□ 1.57
LRTM1Q9HBL6 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
LRTM1Q9HBL6 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
LRTM1Q9HBL6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
LRTM1Q9HBL6 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.86■■□□□ 1.57
LRTM1Q9HBL6 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
LRTM1Q9HBL6 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
LRTM1Q9HBL6 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
LRTM1Q9HBL6 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
LRTM1Q9HBL6 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
LRTM1Q9HBL6 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC24.84■■□□□ 1.57
LRTM1Q9HBL6 AC127502.1-201ENST00000399971 1502 ntBASIC24.84■■□□□ 1.57
LRTM1Q9HBL6 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
LRTM1Q9HBL6 AP004833.2-201ENST00000532228 1454 ntBASIC24.83■■□□□ 1.57
LRTM1Q9HBL6 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
LRTM1Q9HBL6 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
LRTM1Q9HBL6 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
LRTM1Q9HBL6 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
LRTM1Q9HBL6 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.82■■□□□ 1.56
LRTM1Q9HBL6 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC24.82■■□□□ 1.56
LRTM1Q9HBL6 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC24.82■■□□□ 1.56
LRTM1Q9HBL6 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
LRTM1Q9HBL6 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
LRTM1Q9HBL6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
LRTM1Q9HBL6 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
LRTM1Q9HBL6 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
LRTM1Q9HBL6 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
LRTM1Q9HBL6 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC24.81■■□□□ 1.56
LRTM1Q9HBL6 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
LRTM1Q9HBL6 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.81■■□□□ 1.56
LRTM1Q9HBL6 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
LRTM1Q9HBL6 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC24.8■■□□□ 1.56
LRTM1Q9HBL6 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
LRTM1Q9HBL6 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
LRTM1Q9HBL6 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
LRTM1Q9HBL6 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
LRTM1Q9HBL6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
LRTM1Q9HBL6 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC24.79■■□□□ 1.56
LRTM1Q9HBL6 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.79■■□□□ 1.56
LRTM1Q9HBL6 MIR762-201ENST00000390236 83 ntBASIC24.79■■□□□ 1.56
LRTM1Q9HBL6 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
LRTM1Q9HBL6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
LRTM1Q9HBL6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
LRTM1Q9HBL6 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC24.78■■□□□ 1.56
LRTM1Q9HBL6 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
LRTM1Q9HBL6 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
LRTM1Q9HBL6 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC24.78■■□□□ 1.56
LRTM1Q9HBL6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.77■■□□□ 1.56
LRTM1Q9HBL6 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC24.76■■□□□ 1.55
LRTM1Q9HBL6 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
LRTM1Q9HBL6 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
LRTM1Q9HBL6 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
LRTM1Q9HBL6 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.75■■□□□ 1.55
LRTM1Q9HBL6 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
LRTM1Q9HBL6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
LRTM1Q9HBL6 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
LRTM1Q9HBL6 CHML-205ENST00000638160 705 ntTSL 3 BASIC24.74■■□□□ 1.55
LRTM1Q9HBL6 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
LRTM1Q9HBL6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
LRTM1Q9HBL6 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.74■■□□□ 1.55
LRTM1Q9HBL6 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
LRTM1Q9HBL6 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
LRTM1Q9HBL6 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC24.73■■□□□ 1.55
LRTM1Q9HBL6 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
LRTM1Q9HBL6 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
LRTM1Q9HBL6 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
LRTM1Q9HBL6 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
LRTM1Q9HBL6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
LRTM1Q9HBL6 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.71■■□□□ 1.55
LRTM1Q9HBL6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC24.71■■□□□ 1.55
LRTM1Q9HBL6 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
LRTM1Q9HBL6 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
LRTM1Q9HBL6 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
LRTM1Q9HBL6 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
LRTM1Q9HBL6 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
LRTM1Q9HBL6 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
LRTM1Q9HBL6 RPS2-209ENST00000529806 993 ntTSL 3 BASIC24.69■■□□□ 1.54
LRTM1Q9HBL6 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.68■■□□□ 1.54
LRTM1Q9HBL6 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
LRTM1Q9HBL6 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.68■■□□□ 1.54
LRTM1Q9HBL6 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
LRTM1Q9HBL6 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
LRTM1Q9HBL6 SUZ12P1-203ENST00000578195 985 ntBASIC24.67■■□□□ 1.54
LRTM1Q9HBL6 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
LRTM1Q9HBL6 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.67■■□□□ 1.54
LRTM1Q9HBL6 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
LRTM1Q9HBL6 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC24.66■■□□□ 1.54
LRTM1Q9HBL6 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.66■■□□□ 1.54
LRTM1Q9HBL6 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
LRTM1Q9HBL6 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
LRTM1Q9HBL6 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC24.65■■□□□ 1.54
LRTM1Q9HBL6 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
LRTM1Q9HBL6 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
LRTM1Q9HBL6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
LRTM1Q9HBL6 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.64■■□□□ 1.54
LRTM1Q9HBL6 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC24.64■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms