Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
NBPF3Q9H094 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.03■■■□□ 2.56
NBPF3Q9H094 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
NBPF3Q9H094 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
NBPF3Q9H094 MIR4449-201ENST00000578365 66 ntBASIC31.02■■■□□ 2.56
NBPF3Q9H094 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC31.01■■■□□ 2.55
NBPF3Q9H094 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
NBPF3Q9H094 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
NBPF3Q9H094 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
NBPF3Q9H094 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
NBPF3Q9H094 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31■■■□□ 2.55
NBPF3Q9H094 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
NBPF3Q9H094 AC127502.1-201ENST00000399971 1502 ntBASIC30.98■■■□□ 2.55
NBPF3Q9H094 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
NBPF3Q9H094 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.98■■■□□ 2.55
NBPF3Q9H094 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
NBPF3Q9H094 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
NBPF3Q9H094 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
NBPF3Q9H094 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
NBPF3Q9H094 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.55
NBPF3Q9H094 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
NBPF3Q9H094 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.95■■■□□ 2.55
NBPF3Q9H094 AC021231.2-201ENST00000594613 730 ntBASIC30.95■■■□□ 2.55
NBPF3Q9H094 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
NBPF3Q9H094 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC30.94■■■□□ 2.54
NBPF3Q9H094 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
NBPF3Q9H094 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
NBPF3Q9H094 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
NBPF3Q9H094 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC30.94■■■□□ 2.54
NBPF3Q9H094 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC30.93■■■□□ 2.54
NBPF3Q9H094 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC30.93■■■□□ 2.54
NBPF3Q9H094 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
NBPF3Q9H094 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
NBPF3Q9H094 DUX4L29-201ENST00000425409 679 ntBASIC30.91■■■□□ 2.54
NBPF3Q9H094 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC30.91■■■□□ 2.54
NBPF3Q9H094 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
NBPF3Q9H094 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
NBPF3Q9H094 MIR639-201ENST00000384974 98 ntBASIC30.9■■■□□ 2.54
NBPF3Q9H094 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
NBPF3Q9H094 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC30.89■■■□□ 2.54
NBPF3Q9H094 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
NBPF3Q9H094 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
NBPF3Q9H094 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC30.88■■■□□ 2.53
NBPF3Q9H094 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
NBPF3Q9H094 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
NBPF3Q9H094 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
NBPF3Q9H094 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC30.86■■■□□ 2.53
NBPF3Q9H094 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
NBPF3Q9H094 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
NBPF3Q9H094 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC30.85■■■□□ 2.53
NBPF3Q9H094 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
NBPF3Q9H094 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
NBPF3Q9H094 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.83■■■□□ 2.53
NBPF3Q9H094 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.83■■■□□ 2.53
NBPF3Q9H094 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC30.83■■■□□ 2.53
NBPF3Q9H094 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
NBPF3Q9H094 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC30.82■■■□□ 2.52
NBPF3Q9H094 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.82■■■□□ 2.52
NBPF3Q9H094 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
NBPF3Q9H094 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC30.8■■■□□ 2.52
NBPF3Q9H094 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
NBPF3Q9H094 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
NBPF3Q9H094 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
NBPF3Q9H094 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC30.8■■■□□ 2.52
NBPF3Q9H094 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC30.8■■■□□ 2.52
NBPF3Q9H094 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
NBPF3Q9H094 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
NBPF3Q9H094 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC30.79■■■□□ 2.52
NBPF3Q9H094 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
NBPF3Q9H094 AL139393.2-201ENST00000608721 2025 ntBASIC30.78■■■□□ 2.52
NBPF3Q9H094 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC30.78■■■□□ 2.52
NBPF3Q9H094 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
NBPF3Q9H094 AC139426.1-201ENST00000568218 2529 ntBASIC30.78■■■□□ 2.52
NBPF3Q9H094 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC30.77■■■□□ 2.52
NBPF3Q9H094 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.76■■■□□ 2.51
NBPF3Q9H094 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.76■■■□□ 2.51
NBPF3Q9H094 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
NBPF3Q9H094 ABCB10P3-201ENST00000561950 2166 ntBASIC30.75■■■□□ 2.51
NBPF3Q9H094 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
NBPF3Q9H094 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC30.75■■■□□ 2.51
NBPF3Q9H094 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
NBPF3Q9H094 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.75■■■□□ 2.51
NBPF3Q9H094 LINC00273-201ENST00000539813 1452 ntBASIC30.75■■■□□ 2.51
NBPF3Q9H094 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
NBPF3Q9H094 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
NBPF3Q9H094 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
NBPF3Q9H094 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
NBPF3Q9H094 HSD17B1P1-201ENST00000590052 955 ntBASIC30.73■■■□□ 2.51
NBPF3Q9H094 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
NBPF3Q9H094 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
NBPF3Q9H094 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
NBPF3Q9H094 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
NBPF3Q9H094 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC30.72■■■□□ 2.51
NBPF3Q9H094 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
NBPF3Q9H094 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.71■■■□□ 2.51
NBPF3Q9H094 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC30.71■■■□□ 2.51
NBPF3Q9H094 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.71■■■□□ 2.51
NBPF3Q9H094 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC30.7■■■□□ 2.5
NBPF3Q9H094 AC135983.2-203ENST00000454486 1613 ntBASIC30.69■■■□□ 2.5
NBPF3Q9H094 WHAMMP2-203ENST00000563942 1603 ntBASIC30.67■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms