Protein–RNA interactions for Protein: Q99884

SLC6A7, Sodium-dependent proline transporter, humanhuman

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A7Q99884 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SLC6A7Q99884 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SLC6A7Q99884 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC22.35■■□□□ 1.17
SLC6A7Q99884 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
SLC6A7Q99884 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SLC6A7Q99884 DUX4L28-201ENST00000623687 678 ntBASIC22.33■■□□□ 1.17
SLC6A7Q99884 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SLC6A7Q99884 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SLC6A7Q99884 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SLC6A7Q99884 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SLC6A7Q99884 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SLC6A7Q99884 MIR762-201ENST00000390236 83 ntBASIC22.31■■□□□ 1.16
SLC6A7Q99884 AC087741.3-201ENST00000624270 1347 ntBASIC22.31■■□□□ 1.16
SLC6A7Q99884 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SLC6A7Q99884 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
SLC6A7Q99884 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC22.3■■□□□ 1.16
SLC6A7Q99884 CHML-205ENST00000638160 705 ntTSL 3 BASIC22.3■■□□□ 1.16
SLC6A7Q99884 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC22.3■■□□□ 1.16
SLC6A7Q99884 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SLC6A7Q99884 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC22.29■■□□□ 1.16
SLC6A7Q99884 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC22.28■■□□□ 1.16
SLC6A7Q99884 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SLC6A7Q99884 AC005559.1-201ENST00000589661 871 ntBASIC22.27■■□□□ 1.16
SLC6A7Q99884 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.16
SLC6A7Q99884 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SLC6A7Q99884 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
SLC6A7Q99884 ABHD17AP4-201ENST00000411545 909 ntBASIC22.26■■□□□ 1.15
SLC6A7Q99884 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
SLC6A7Q99884 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SLC6A7Q99884 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLC6A7Q99884 MIR7108-201ENST00000614319 87 ntBASIC22.25■■□□□ 1.15
SLC6A7Q99884 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.25■■□□□ 1.15
SLC6A7Q99884 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SLC6A7Q99884 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SLC6A7Q99884 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SLC6A7Q99884 AC044849.2-201ENST00000606596 710 ntBASIC22.24■■□□□ 1.15
SLC6A7Q99884 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.23■■□□□ 1.15
SLC6A7Q99884 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SLC6A7Q99884 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SLC6A7Q99884 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SLC6A7Q99884 AL139393.2-201ENST00000608721 2025 ntBASIC22.23■■□□□ 1.15
SLC6A7Q99884 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SLC6A7Q99884 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
SLC6A7Q99884 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC22.22■■□□□ 1.15
SLC6A7Q99884 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
SLC6A7Q99884 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SLC6A7Q99884 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
SLC6A7Q99884 DRD5P2-201ENST00000421395 2012 ntBASIC22.21■■□□□ 1.15
SLC6A7Q99884 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SLC6A7Q99884 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SLC6A7Q99884 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
SLC6A7Q99884 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SLC6A7Q99884 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC22.21■■□□□ 1.15
SLC6A7Q99884 MLEC-202ENST00000412616 841 ntTSL 3 BASIC22.21■■□□□ 1.15
SLC6A7Q99884 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SLC6A7Q99884 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SLC6A7Q99884 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
SLC6A7Q99884 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC22.2■■□□□ 1.14
SLC6A7Q99884 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
SLC6A7Q99884 AL121749.1-202ENST00000609313 2153 ntBASIC22.2■■□□□ 1.14
SLC6A7Q99884 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
SLC6A7Q99884 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SLC6A7Q99884 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SLC6A7Q99884 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
SLC6A7Q99884 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SLC6A7Q99884 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SLC6A7Q99884 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SLC6A7Q99884 PVT1-219ENST00000523427 938 ntTSL 3 BASIC22.17■■□□□ 1.14
SLC6A7Q99884 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SLC6A7Q99884 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SLC6A7Q99884 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SLC6A7Q99884 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SLC6A7Q99884 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SLC6A7Q99884 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SLC6A7Q99884 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SLC6A7Q99884 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLC6A7Q99884 DENR-202ENST00000455982 1052 ntTSL 5 BASIC22.15■■□□□ 1.14
SLC6A7Q99884 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLC6A7Q99884 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.15■■□□□ 1.14
SLC6A7Q99884 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SLC6A7Q99884 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SLC6A7Q99884 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SLC6A7Q99884 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC6A7Q99884 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SLC6A7Q99884 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC6A7Q99884 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC6A7Q99884 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC6A7Q99884 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
SLC6A7Q99884 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC22.12■■□□□ 1.13
SLC6A7Q99884 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
SLC6A7Q99884 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SLC6A7Q99884 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
SLC6A7Q99884 WASH5P-204ENST00000632292 975 ntBASIC22.11■■□□□ 1.13
SLC6A7Q99884 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC22.11■■□□□ 1.13
SLC6A7Q99884 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
SLC6A7Q99884 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC22.1■■□□□ 1.13
SLC6A7Q99884 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SLC6A7Q99884 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SLC6A7Q99884 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SLC6A7Q99884 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms