Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RNF25Q96BH1 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.11■■□□□ 1.93
RNF25Q96BH1 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
RNF25Q96BH1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
RNF25Q96BH1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC27.1■■□□□ 1.93
RNF25Q96BH1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
RNF25Q96BH1 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
RNF25Q96BH1 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC27.1■■□□□ 1.93
RNF25Q96BH1 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
RNF25Q96BH1 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
RNF25Q96BH1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC27.09■■□□□ 1.93
RNF25Q96BH1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RNF25Q96BH1 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC27.08■■□□□ 1.93
RNF25Q96BH1 MIR762-201ENST00000390236 83 ntBASIC27.08■■□□□ 1.93
RNF25Q96BH1 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.08■■□□□ 1.93
RNF25Q96BH1 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC27.07■■□□□ 1.92
RNF25Q96BH1 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC27.07■■□□□ 1.92
RNF25Q96BH1 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
RNF25Q96BH1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
RNF25Q96BH1 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC27.06■■□□□ 1.92
RNF25Q96BH1 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC27.06■■□□□ 1.92
RNF25Q96BH1 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC27.05■■□□□ 1.92
RNF25Q96BH1 SUZ12P1-203ENST00000578195 985 ntBASIC27.05■■□□□ 1.92
RNF25Q96BH1 DRD5P2-201ENST00000421395 2012 ntBASIC27.04■■□□□ 1.92
RNF25Q96BH1 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
RNF25Q96BH1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC27.04■■□□□ 1.92
RNF25Q96BH1 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC27.04■■□□□ 1.92
RNF25Q96BH1 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
RNF25Q96BH1 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
RNF25Q96BH1 AC127502.1-201ENST00000399971 1502 ntBASIC27.01■■□□□ 1.91
RNF25Q96BH1 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
RNF25Q96BH1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC27.01■■□□□ 1.91
RNF25Q96BH1 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
RNF25Q96BH1 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC27■■□□□ 1.91
RNF25Q96BH1 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC27■■□□□ 1.91
RNF25Q96BH1 CHML-205ENST00000638160 705 ntTSL 3 BASIC27■■□□□ 1.91
RNF25Q96BH1 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RNF25Q96BH1 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
RNF25Q96BH1 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
RNF25Q96BH1 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.99■■□□□ 1.91
RNF25Q96BH1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.99■■□□□ 1.91
RNF25Q96BH1 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RNF25Q96BH1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.98■■□□□ 1.91
RNF25Q96BH1 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RNF25Q96BH1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
RNF25Q96BH1 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.96■■□□□ 1.91
RNF25Q96BH1 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.96■■□□□ 1.91
RNF25Q96BH1 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
RNF25Q96BH1 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
RNF25Q96BH1 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RNF25Q96BH1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
RNF25Q96BH1 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
RNF25Q96BH1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.94■■□□□ 1.9
RNF25Q96BH1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
RNF25Q96BH1 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
RNF25Q96BH1 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
RNF25Q96BH1 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.93■■□□□ 1.9
RNF25Q96BH1 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RNF25Q96BH1 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
RNF25Q96BH1 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.91■■□□□ 1.9
RNF25Q96BH1 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RNF25Q96BH1 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RNF25Q96BH1 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.91■■□□□ 1.9
RNF25Q96BH1 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RNF25Q96BH1 AC005559.1-201ENST00000589661 871 ntBASIC26.9■■□□□ 1.9
RNF25Q96BH1 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.9■■□□□ 1.9
RNF25Q96BH1 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.89■■□□□ 1.9
RNF25Q96BH1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.89■■□□□ 1.89
RNF25Q96BH1 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
RNF25Q96BH1 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
RNF25Q96BH1 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RNF25Q96BH1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
RNF25Q96BH1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
RNF25Q96BH1 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RNF25Q96BH1 AP004833.2-201ENST00000532228 1454 ntBASIC26.87■■□□□ 1.89
RNF25Q96BH1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RNF25Q96BH1 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RNF25Q96BH1 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
RNF25Q96BH1 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
RNF25Q96BH1 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.86■■□□□ 1.89
RNF25Q96BH1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.85■■□□□ 1.89
RNF25Q96BH1 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.85■■□□□ 1.89
RNF25Q96BH1 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.85■■□□□ 1.89
RNF25Q96BH1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RNF25Q96BH1 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.84■■□□□ 1.89
RNF25Q96BH1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
RNF25Q96BH1 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
RNF25Q96BH1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
RNF25Q96BH1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
RNF25Q96BH1 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
RNF25Q96BH1 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
RNF25Q96BH1 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RNF25Q96BH1 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.82■■□□□ 1.88
RNF25Q96BH1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
RNF25Q96BH1 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
RNF25Q96BH1 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.8■■□□□ 1.88
RNF25Q96BH1 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.8■■□□□ 1.88
RNF25Q96BH1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
RNF25Q96BH1 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
RNF25Q96BH1 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms