Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
RTL9Q8NET4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
RTL9Q8NET4 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC32.45■■■□□ 2.78
RTL9Q8NET4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC32.44■■■□□ 2.78
RTL9Q8NET4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
RTL9Q8NET4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
RTL9Q8NET4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC32.43■■■□□ 2.78
RTL9Q8NET4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC32.42■■■□□ 2.78
RTL9Q8NET4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC32.42■■■□□ 2.78
RTL9Q8NET4 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
RTL9Q8NET4 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC32.42■■■□□ 2.78
RTL9Q8NET4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC32.42■■■□□ 2.78
RTL9Q8NET4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC32.42■■■□□ 2.78
RTL9Q8NET4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC32.42■■■□□ 2.78
RTL9Q8NET4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
RTL9Q8NET4 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC32.4■■■□□ 2.78
RTL9Q8NET4 HES6-205ENST00000409356 528 ntTSL 2 BASIC32.4■■■□□ 2.78
RTL9Q8NET4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC32.4■■■□□ 2.78
RTL9Q8NET4 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
RTL9Q8NET4 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC32.38■■■□□ 2.77
RTL9Q8NET4 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
RTL9Q8NET4 AL135925.1-201ENST00000605920 1701 ntBASIC32.37■■■□□ 2.77
RTL9Q8NET4 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC32.37■■■□□ 2.77
RTL9Q8NET4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC32.37■■■□□ 2.77
RTL9Q8NET4 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
RTL9Q8NET4 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC32.35■■■□□ 2.77
RTL9Q8NET4 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
RTL9Q8NET4 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC32.35■■■□□ 2.77
RTL9Q8NET4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC32.34■■■□□ 2.77
RTL9Q8NET4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
RTL9Q8NET4 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC32.34■■■□□ 2.77
RTL9Q8NET4 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC32.34■■■□□ 2.77
RTL9Q8NET4 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC32.34■■■□□ 2.77
RTL9Q8NET4 ABHD17AP3-201ENST00000503096 1137 ntBASIC32.33■■■□□ 2.77
RTL9Q8NET4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC32.33■■■□□ 2.77
RTL9Q8NET4 AC127502.1-201ENST00000399971 1502 ntBASIC32.32■■■□□ 2.76
RTL9Q8NET4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.76
RTL9Q8NET4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC32.32■■■□□ 2.76
RTL9Q8NET4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC32.31■■■□□ 2.76
RTL9Q8NET4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
RTL9Q8NET4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC32.28■■■□□ 2.76
RTL9Q8NET4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC32.27■■■□□ 2.76
RTL9Q8NET4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
RTL9Q8NET4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC32.27■■■□□ 2.76
RTL9Q8NET4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC32.25■■■□□ 2.75
RTL9Q8NET4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC32.25■■■□□ 2.75
RTL9Q8NET4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
RTL9Q8NET4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC32.24■■■□□ 2.75
RTL9Q8NET4 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
RTL9Q8NET4 AC135983.2-203ENST00000454486 1613 ntBASIC32.23■■■□□ 2.75
RTL9Q8NET4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
RTL9Q8NET4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
RTL9Q8NET4 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC32.21■■■□□ 2.75
RTL9Q8NET4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC32.21■■■□□ 2.75
RTL9Q8NET4 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC32.21■■■□□ 2.75
RTL9Q8NET4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC32.2■■■□□ 2.75
RTL9Q8NET4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC32.2■■■□□ 2.75
RTL9Q8NET4 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC32.2■■■□□ 2.75
RTL9Q8NET4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC32.19■■■□□ 2.74
RTL9Q8NET4 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
RTL9Q8NET4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC32.17■■■□□ 2.74
RTL9Q8NET4 WHAMMP2-203ENST00000563942 1603 ntBASIC32.17■■■□□ 2.74
RTL9Q8NET4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC32.17■■■□□ 2.74
RTL9Q8NET4 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
RTL9Q8NET4 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC32.16■■■□□ 2.74
RTL9Q8NET4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC32.15■■■□□ 2.74
RTL9Q8NET4 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC32.15■■■□□ 2.74
RTL9Q8NET4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC32.15■■■□□ 2.74
RTL9Q8NET4 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC32.14■■■□□ 2.74
RTL9Q8NET4 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC32.13■■■□□ 2.73
RTL9Q8NET4 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC32.12■■■□□ 2.73
RTL9Q8NET4 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
RTL9Q8NET4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
RTL9Q8NET4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
RTL9Q8NET4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
RTL9Q8NET4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
RTL9Q8NET4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC32.11■■■□□ 2.73
RTL9Q8NET4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
RTL9Q8NET4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
RTL9Q8NET4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC32.11■■■□□ 2.73
RTL9Q8NET4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC32.11■■■□□ 2.73
RTL9Q8NET4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC32.11■■■□□ 2.73
RTL9Q8NET4 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
RTL9Q8NET4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC32.1■■■□□ 2.73
RTL9Q8NET4 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC32.1■■■□□ 2.73
RTL9Q8NET4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC32.1■■■□□ 2.73
RTL9Q8NET4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC32.1■■■□□ 2.73
RTL9Q8NET4 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
RTL9Q8NET4 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC32.08■■■□□ 2.73
RTL9Q8NET4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
RTL9Q8NET4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC32.08■■■□□ 2.73
RTL9Q8NET4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC32.08■■■□□ 2.73
RTL9Q8NET4 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
RTL9Q8NET4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC32.07■■■□□ 2.73
RTL9Q8NET4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC32.07■■■□□ 2.72
RTL9Q8NET4 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC32.06■■■□□ 2.72
RTL9Q8NET4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
RTL9Q8NET4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC32.06■■■□□ 2.72
RTL9Q8NET4 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC32.05■■■□□ 2.72
RTL9Q8NET4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms