Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC22.72■■□□□ 1.23
CPEB3Q8NE35 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CPEB3Q8NE35 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CPEB3Q8NE35 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
CPEB3Q8NE35 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CPEB3Q8NE35 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
CPEB3Q8NE35 AC044849.2-201ENST00000606596 710 ntBASIC22.71■■□□□ 1.23
CPEB3Q8NE35 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CPEB3Q8NE35 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CPEB3Q8NE35 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CPEB3Q8NE35 AC127502.1-201ENST00000399971 1502 ntBASIC22.68■■□□□ 1.22
CPEB3Q8NE35 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
CPEB3Q8NE35 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC22.67■■□□□ 1.22
CPEB3Q8NE35 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CPEB3Q8NE35 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CPEB3Q8NE35 AL139393.2-201ENST00000608721 2025 ntBASIC22.65■■□□□ 1.22
CPEB3Q8NE35 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CPEB3Q8NE35 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CPEB3Q8NE35 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC22.64■■□□□ 1.21
CPEB3Q8NE35 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CPEB3Q8NE35 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CPEB3Q8NE35 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC22.63■■□□□ 1.21
CPEB3Q8NE35 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC22.63■■□□□ 1.21
CPEB3Q8NE35 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CPEB3Q8NE35 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
CPEB3Q8NE35 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC22.61■■□□□ 1.21
CPEB3Q8NE35 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
CPEB3Q8NE35 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CPEB3Q8NE35 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CPEB3Q8NE35 BOD1-206ENST00000480951 814 ntTSL 2 BASIC22.61■■□□□ 1.21
CPEB3Q8NE35 CIB2-204ENST00000557846 934 ntTSL 3 BASIC22.61■■□□□ 1.21
CPEB3Q8NE35 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CPEB3Q8NE35 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
CPEB3Q8NE35 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
CPEB3Q8NE35 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CPEB3Q8NE35 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC22.6■■□□□ 1.21
CPEB3Q8NE35 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CPEB3Q8NE35 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.21
CPEB3Q8NE35 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
CPEB3Q8NE35 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CPEB3Q8NE35 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CPEB3Q8NE35 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC22.58■■□□□ 1.21
CPEB3Q8NE35 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC22.58■■□□□ 1.2
CPEB3Q8NE35 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CPEB3Q8NE35 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC22.57■■□□□ 1.2
CPEB3Q8NE35 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CPEB3Q8NE35 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CPEB3Q8NE35 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC22.56■■□□□ 1.2
CPEB3Q8NE35 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CPEB3Q8NE35 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.56■■□□□ 1.2
CPEB3Q8NE35 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPEB3Q8NE35 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
CPEB3Q8NE35 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22.55■■□□□ 1.2
CPEB3Q8NE35 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC22.55■■□□□ 1.2
CPEB3Q8NE35 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPEB3Q8NE35 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CPEB3Q8NE35 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CPEB3Q8NE35 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CPEB3Q8NE35 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CPEB3Q8NE35 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
CPEB3Q8NE35 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CPEB3Q8NE35 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC22.52■■□□□ 1.2
CPEB3Q8NE35 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CPEB3Q8NE35 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CPEB3Q8NE35 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CPEB3Q8NE35 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CPEB3Q8NE35 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CPEB3Q8NE35 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
CPEB3Q8NE35 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CPEB3Q8NE35 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CPEB3Q8NE35 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CPEB3Q8NE35 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC22.49■■□□□ 1.19
CPEB3Q8NE35 AC021231.2-201ENST00000594613 730 ntBASIC22.49■■□□□ 1.19
CPEB3Q8NE35 SHF-206ENST00000560471 2499 ntTSL 5 BASIC22.49■■□□□ 1.19
CPEB3Q8NE35 AP004833.2-201ENST00000532228 1454 ntBASIC22.48■■□□□ 1.19
CPEB3Q8NE35 DUX4L29-201ENST00000425409 679 ntBASIC22.48■■□□□ 1.19
CPEB3Q8NE35 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CPEB3Q8NE35 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
CPEB3Q8NE35 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
CPEB3Q8NE35 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CPEB3Q8NE35 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CPEB3Q8NE35 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22.46■■□□□ 1.19
CPEB3Q8NE35 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CPEB3Q8NE35 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.45■■□□□ 1.18
CPEB3Q8NE35 LINC00273-201ENST00000539813 1452 ntBASIC22.45■■□□□ 1.18
CPEB3Q8NE35 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CPEB3Q8NE35 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
CPEB3Q8NE35 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CPEB3Q8NE35 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.43■■□□□ 1.18
CPEB3Q8NE35 AC135983.2-203ENST00000454486 1613 ntBASIC22.43■■□□□ 1.18
CPEB3Q8NE35 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CPEB3Q8NE35 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CPEB3Q8NE35 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC22.43■■□□□ 1.18
CPEB3Q8NE35 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
CPEB3Q8NE35 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
CPEB3Q8NE35 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CPEB3Q8NE35 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC22.42■■□□□ 1.18
CPEB3Q8NE35 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CPEB3Q8NE35 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.42■■□□□ 1.18
CPEB3Q8NE35 HGH1-207ENST00000628266 258 ntTSL 5 BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms