Protein–RNA interactions for Protein: Q8NC56

LEMD2, LEM domain-containing protein 2, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2Q8NC56 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
LEMD2Q8NC56 ST7-202ENST00000323984 2142 ntTSL 5 BASIC27.35■■□□□ 1.97
LEMD2Q8NC56 ST7-207ENST00000393449 2127 ntTSL 5 BASIC27.35■■□□□ 1.97
LEMD2Q8NC56 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
LEMD2Q8NC56 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
LEMD2Q8NC56 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC27.34■■□□□ 1.97
LEMD2Q8NC56 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
LEMD2Q8NC56 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC27.33■■□□□ 1.97
LEMD2Q8NC56 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
LEMD2Q8NC56 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
LEMD2Q8NC56 ABHD17AP3-201ENST00000503096 1137 ntBASIC27.31■■□□□ 1.96
LEMD2Q8NC56 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
LEMD2Q8NC56 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
LEMD2Q8NC56 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
LEMD2Q8NC56 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
LEMD2Q8NC56 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
LEMD2Q8NC56 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
LEMD2Q8NC56 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
LEMD2Q8NC56 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
LEMD2Q8NC56 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC27.28■■□□□ 1.96
LEMD2Q8NC56 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC27.28■■□□□ 1.96
LEMD2Q8NC56 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
LEMD2Q8NC56 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
LEMD2Q8NC56 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC27.26■■□□□ 1.96
LEMD2Q8NC56 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC27.26■■□□□ 1.96
LEMD2Q8NC56 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
LEMD2Q8NC56 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
LEMD2Q8NC56 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC27.25■■□□□ 1.95
LEMD2Q8NC56 CHST11-202ENST00000546689 756 ntTSL 2 BASIC27.25■■□□□ 1.95
LEMD2Q8NC56 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC27.25■■□□□ 1.95
LEMD2Q8NC56 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC27.24■■□□□ 1.95
LEMD2Q8NC56 BRD4-212ENST00000630599 726 ntTSL 2 BASIC27.24■■□□□ 1.95
LEMD2Q8NC56 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
LEMD2Q8NC56 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
LEMD2Q8NC56 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
LEMD2Q8NC56 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
LEMD2Q8NC56 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
LEMD2Q8NC56 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
LEMD2Q8NC56 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
LEMD2Q8NC56 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
LEMD2Q8NC56 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
LEMD2Q8NC56 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
LEMD2Q8NC56 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
LEMD2Q8NC56 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
LEMD2Q8NC56 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
LEMD2Q8NC56 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
LEMD2Q8NC56 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
LEMD2Q8NC56 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
LEMD2Q8NC56 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
LEMD2Q8NC56 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
LEMD2Q8NC56 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
LEMD2Q8NC56 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC27.2■■□□□ 1.94
LEMD2Q8NC56 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC27.2■■□□□ 1.94
LEMD2Q8NC56 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC27.19■■□□□ 1.94
LEMD2Q8NC56 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC27.19■■□□□ 1.94
LEMD2Q8NC56 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
LEMD2Q8NC56 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
LEMD2Q8NC56 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
LEMD2Q8NC56 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC27.18■■□□□ 1.94
LEMD2Q8NC56 SRP68-213ENST00000629930 165 ntTSL 5 BASIC27.18■■□□□ 1.94
LEMD2Q8NC56 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
LEMD2Q8NC56 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
LEMD2Q8NC56 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC27.16■■□□□ 1.94
LEMD2Q8NC56 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC27.14■■□□□ 1.94
LEMD2Q8NC56 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
LEMD2Q8NC56 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
LEMD2Q8NC56 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC27.13■■□□□ 1.93
LEMD2Q8NC56 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
LEMD2Q8NC56 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
LEMD2Q8NC56 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
LEMD2Q8NC56 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC27.12■■□□□ 1.93
LEMD2Q8NC56 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC27.11■■□□□ 1.93
LEMD2Q8NC56 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC27.11■■□□□ 1.93
LEMD2Q8NC56 AC127502.1-201ENST00000399971 1502 ntBASIC27.11■■□□□ 1.93
LEMD2Q8NC56 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
LEMD2Q8NC56 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
LEMD2Q8NC56 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
LEMD2Q8NC56 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC27.09■■□□□ 1.93
LEMD2Q8NC56 AC008813.1-201ENST00000536597 885 ntBASIC27.09■■□□□ 1.93
LEMD2Q8NC56 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
LEMD2Q8NC56 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
LEMD2Q8NC56 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
LEMD2Q8NC56 TPT1-202ENST00000379055 948 ntTSL 2 BASIC27.07■■□□□ 1.92
LEMD2Q8NC56 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC27.07■■□□□ 1.92
LEMD2Q8NC56 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
LEMD2Q8NC56 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC27.06■■□□□ 1.92
LEMD2Q8NC56 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC27.06■■□□□ 1.92
LEMD2Q8NC56 AC135983.2-203ENST00000454486 1613 ntBASIC27.05■■□□□ 1.92
LEMD2Q8NC56 AL135925.1-201ENST00000605920 1701 ntBASIC27.05■■□□□ 1.92
LEMD2Q8NC56 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
LEMD2Q8NC56 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC27.04■■□□□ 1.92
LEMD2Q8NC56 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
LEMD2Q8NC56 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
LEMD2Q8NC56 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC27.02■■□□□ 1.92
LEMD2Q8NC56 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
LEMD2Q8NC56 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
LEMD2Q8NC56 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
LEMD2Q8NC56 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC27■■□□□ 1.91
LEMD2Q8NC56 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
LEMD2Q8NC56 GPX1-201ENST00000419349 1106 ntBASIC27■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms