Protein–RNA interactions for Protein: Q8N5G0

SMIM20, Small integral membrane protein 20, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20Q8N5G0 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SMIM20Q8N5G0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMIM20Q8N5G0 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMIM20Q8N5G0 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC16.32■□□□□ 0.2
SMIM20Q8N5G0 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SMIM20Q8N5G0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMIM20Q8N5G0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM20Q8N5G0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM20Q8N5G0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC16.31■□□□□ 0.2
SMIM20Q8N5G0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM20Q8N5G0 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM20Q8N5G0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC16.31■□□□□ 0.2
SMIM20Q8N5G0 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM20Q8N5G0 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM20Q8N5G0 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM20Q8N5G0 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
SMIM20Q8N5G0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMIM20Q8N5G0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMIM20Q8N5G0 RNF165-205ENST00000588679 2904 ntBASIC16.3■□□□□ 0.2
SMIM20Q8N5G0 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMIM20Q8N5G0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMIM20Q8N5G0 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
SMIM20Q8N5G0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMIM20Q8N5G0 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMIM20Q8N5G0 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMIM20Q8N5G0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMIM20Q8N5G0 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMIM20Q8N5G0 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMIM20Q8N5G0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMIM20Q8N5G0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMIM20Q8N5G0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SMIM20Q8N5G0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.28■□□□□ 0.2
SMIM20Q8N5G0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SMIM20Q8N5G0 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMIM20Q8N5G0 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMIM20Q8N5G0 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMIM20Q8N5G0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM20Q8N5G0 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM20Q8N5G0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM20Q8N5G0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM20Q8N5G0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM20Q8N5G0 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC16.25■□□□□ 0.19
SMIM20Q8N5G0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM20Q8N5G0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM20Q8N5G0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM20Q8N5G0 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SMIM20Q8N5G0 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
SMIM20Q8N5G0 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMIM20Q8N5G0 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMIM20Q8N5G0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMIM20Q8N5G0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM20Q8N5G0 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM20Q8N5G0 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC16.23■□□□□ 0.19
SMIM20Q8N5G0 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM20Q8N5G0 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SMIM20Q8N5G0 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM20Q8N5G0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM20Q8N5G0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM20Q8N5G0 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC16.22■□□□□ 0.19
SMIM20Q8N5G0 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SMIM20Q8N5G0 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM20Q8N5G0 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM20Q8N5G0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM20Q8N5G0 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM20Q8N5G0 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM20Q8N5G0 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SMIM20Q8N5G0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM20Q8N5G0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM20Q8N5G0 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM20Q8N5G0 AC133561.1-201ENST00000568600 2415 ntBASIC16.21■□□□□ 0.19
SMIM20Q8N5G0 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SMIM20Q8N5G0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM20Q8N5G0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.19■□□□□ 0.18
SMIM20Q8N5G0 AC142086.6-201ENST00000621154 1765 ntBASIC16.19■□□□□ 0.18
SMIM20Q8N5G0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.19■□□□□ 0.18
SMIM20Q8N5G0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC16.19■□□□□ 0.18
SMIM20Q8N5G0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM20Q8N5G0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SMIM20Q8N5G0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM20Q8N5G0 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM20Q8N5G0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM20Q8N5G0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM20Q8N5G0 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM20Q8N5G0 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM20Q8N5G0 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SMIM20Q8N5G0 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM20Q8N5G0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.18■□□□□ 0.18
SMIM20Q8N5G0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC16.17■□□□□ 0.18
SMIM20Q8N5G0 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMIM20Q8N5G0 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMIM20Q8N5G0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SMIM20Q8N5G0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
SMIM20Q8N5G0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMIM20Q8N5G0 AC145285.7-201ENST00000614819 1539 ntBASIC16.15■□□□□ 0.18
SMIM20Q8N5G0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMIM20Q8N5G0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SMIM20Q8N5G0 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMIM20Q8N5G0 AC093323.1-202ENST00000635031 2045 ntBASIC16.14■□□□□ 0.17
SMIM20Q8N5G0 AL024507.2-201ENST00000606070 2574 ntBASIC16.14■□□□□ 0.17
SMIM20Q8N5G0 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms