Protein–RNA interactions for Protein: Q8IXQ8

PDZD9, PDZ domain-containing protein 9, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD9Q8IXQ8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PDZD9Q8IXQ8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PDZD9Q8IXQ8 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PDZD9Q8IXQ8 AP006261.1-201ENST00000584783 668 ntBASIC22.06■■□□□ 1.12
PDZD9Q8IXQ8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC22.06■■□□□ 1.12
PDZD9Q8IXQ8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDZD9Q8IXQ8 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
PDZD9Q8IXQ8 CHML-205ENST00000638160 705 ntTSL 3 BASIC22.05■■□□□ 1.12
PDZD9Q8IXQ8 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDZD9Q8IXQ8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDZD9Q8IXQ8 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDZD9Q8IXQ8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDZD9Q8IXQ8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC22.03■■□□□ 1.12
PDZD9Q8IXQ8 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDZD9Q8IXQ8 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
PDZD9Q8IXQ8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PDZD9Q8IXQ8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC22.02■■□□□ 1.12
PDZD9Q8IXQ8 AC005559.1-201ENST00000589661 871 ntBASIC22.02■■□□□ 1.12
PDZD9Q8IXQ8 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDZD9Q8IXQ8 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PDZD9Q8IXQ8 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
PDZD9Q8IXQ8 DUX4L28-201ENST00000623687 678 ntBASIC22.01■■□□□ 1.11
PDZD9Q8IXQ8 MIR3665-201ENST00000578708 105 ntBASIC22■■□□□ 1.11
PDZD9Q8IXQ8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
PDZD9Q8IXQ8 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PDZD9Q8IXQ8 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.98■■□□□ 1.11
PDZD9Q8IXQ8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PDZD9Q8IXQ8 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PDZD9Q8IXQ8 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
PDZD9Q8IXQ8 AL121749.1-202ENST00000609313 2153 ntBASIC21.98■■□□□ 1.11
PDZD9Q8IXQ8 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
PDZD9Q8IXQ8 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDZD9Q8IXQ8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.97■■□□□ 1.11
PDZD9Q8IXQ8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
PDZD9Q8IXQ8 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PDZD9Q8IXQ8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PDZD9Q8IXQ8 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PDZD9Q8IXQ8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
PDZD9Q8IXQ8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PDZD9Q8IXQ8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.96■■□□□ 1.11
PDZD9Q8IXQ8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDZD9Q8IXQ8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PDZD9Q8IXQ8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
PDZD9Q8IXQ8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDZD9Q8IXQ8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PDZD9Q8IXQ8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDZD9Q8IXQ8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.94■■□□□ 1.1
PDZD9Q8IXQ8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PDZD9Q8IXQ8 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDZD9Q8IXQ8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.93■■□□□ 1.1
PDZD9Q8IXQ8 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDZD9Q8IXQ8 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.92■■□□□ 1.1
PDZD9Q8IXQ8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
PDZD9Q8IXQ8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.9■■□□□ 1.1
PDZD9Q8IXQ8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDZD9Q8IXQ8 AC087741.3-201ENST00000624270 1347 ntBASIC21.9■■□□□ 1.1
PDZD9Q8IXQ8 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDZD9Q8IXQ8 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDZD9Q8IXQ8 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
PDZD9Q8IXQ8 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.1
PDZD9Q8IXQ8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.89■■□□□ 1.09
PDZD9Q8IXQ8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
PDZD9Q8IXQ8 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDZD9Q8IXQ8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PDZD9Q8IXQ8 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
PDZD9Q8IXQ8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDZD9Q8IXQ8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDZD9Q8IXQ8 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDZD9Q8IXQ8 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.87■■□□□ 1.09
PDZD9Q8IXQ8 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
PDZD9Q8IXQ8 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDZD9Q8IXQ8 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDZD9Q8IXQ8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDZD9Q8IXQ8 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PDZD9Q8IXQ8 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.87■■□□□ 1.09
PDZD9Q8IXQ8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
PDZD9Q8IXQ8 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
PDZD9Q8IXQ8 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PDZD9Q8IXQ8 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDZD9Q8IXQ8 ST7-AS1-201ENST00000456775 1889 ntBASIC21.86■■□□□ 1.09
PDZD9Q8IXQ8 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDZD9Q8IXQ8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PDZD9Q8IXQ8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.85■■□□□ 1.09
PDZD9Q8IXQ8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDZD9Q8IXQ8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.85■■□□□ 1.09
PDZD9Q8IXQ8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDZD9Q8IXQ8 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDZD9Q8IXQ8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.85■■□□□ 1.09
PDZD9Q8IXQ8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PDZD9Q8IXQ8 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDZD9Q8IXQ8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDZD9Q8IXQ8 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDZD9Q8IXQ8 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
PDZD9Q8IXQ8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.84■■□□□ 1.09
PDZD9Q8IXQ8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
PDZD9Q8IXQ8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.83■■□□□ 1.09
PDZD9Q8IXQ8 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PDZD9Q8IXQ8 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PDZD9Q8IXQ8 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PDZD9Q8IXQ8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms