Protein–RNA interactions for Protein: Q8IWY4

SCUBE1, Signal peptide, CUB and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1Q8IWY4 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SCUBE1Q8IWY4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SCUBE1Q8IWY4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.43■■□□□ 1.66
SCUBE1Q8IWY4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SCUBE1Q8IWY4 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SCUBE1Q8IWY4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC25.42■■□□□ 1.66
SCUBE1Q8IWY4 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC25.42■■□□□ 1.66
SCUBE1Q8IWY4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC25.42■■□□□ 1.66
SCUBE1Q8IWY4 DRD5P2-201ENST00000421395 2012 ntBASIC25.41■■□□□ 1.66
SCUBE1Q8IWY4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
SCUBE1Q8IWY4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SCUBE1Q8IWY4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SCUBE1Q8IWY4 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC25.4■■□□□ 1.66
SCUBE1Q8IWY4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SCUBE1Q8IWY4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SCUBE1Q8IWY4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SCUBE1Q8IWY4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
SCUBE1Q8IWY4 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SCUBE1Q8IWY4 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
SCUBE1Q8IWY4 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SCUBE1Q8IWY4 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
SCUBE1Q8IWY4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.35■■□□□ 1.65
SCUBE1Q8IWY4 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SCUBE1Q8IWY4 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SCUBE1Q8IWY4 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.35■■□□□ 1.65
SCUBE1Q8IWY4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
SCUBE1Q8IWY4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SCUBE1Q8IWY4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.34■■□□□ 1.65
SCUBE1Q8IWY4 AL139393.2-201ENST00000608721 2025 ntBASIC25.34■■□□□ 1.65
SCUBE1Q8IWY4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
SCUBE1Q8IWY4 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
SCUBE1Q8IWY4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SCUBE1Q8IWY4 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SCUBE1Q8IWY4 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SCUBE1Q8IWY4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
SCUBE1Q8IWY4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SCUBE1Q8IWY4 DENR-202ENST00000455982 1052 ntTSL 5 BASIC25.32■■□□□ 1.64
SCUBE1Q8IWY4 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.32■■□□□ 1.64
SCUBE1Q8IWY4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SCUBE1Q8IWY4 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
SCUBE1Q8IWY4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SCUBE1Q8IWY4 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SCUBE1Q8IWY4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SCUBE1Q8IWY4 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SCUBE1Q8IWY4 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SCUBE1Q8IWY4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
SCUBE1Q8IWY4 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SCUBE1Q8IWY4 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
SCUBE1Q8IWY4 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SCUBE1Q8IWY4 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SCUBE1Q8IWY4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
SCUBE1Q8IWY4 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
SCUBE1Q8IWY4 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.28■■□□□ 1.64
SCUBE1Q8IWY4 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
SCUBE1Q8IWY4 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SCUBE1Q8IWY4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
SCUBE1Q8IWY4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SCUBE1Q8IWY4 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.25■■□□□ 1.63
SCUBE1Q8IWY4 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SCUBE1Q8IWY4 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.24■■□□□ 1.63
SCUBE1Q8IWY4 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.24■■□□□ 1.63
SCUBE1Q8IWY4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SCUBE1Q8IWY4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.22■■□□□ 1.63
SCUBE1Q8IWY4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SCUBE1Q8IWY4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SCUBE1Q8IWY4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SCUBE1Q8IWY4 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SCUBE1Q8IWY4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SCUBE1Q8IWY4 MIR762-201ENST00000390236 83 ntBASIC25.2■■□□□ 1.62
SCUBE1Q8IWY4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SCUBE1Q8IWY4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SCUBE1Q8IWY4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.19■■□□□ 1.62
SCUBE1Q8IWY4 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SCUBE1Q8IWY4 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.19■■□□□ 1.62
SCUBE1Q8IWY4 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SCUBE1Q8IWY4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.19■■□□□ 1.62
SCUBE1Q8IWY4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
SCUBE1Q8IWY4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SCUBE1Q8IWY4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SCUBE1Q8IWY4 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SCUBE1Q8IWY4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.18■■□□□ 1.62
SCUBE1Q8IWY4 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SCUBE1Q8IWY4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SCUBE1Q8IWY4 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.18■■□□□ 1.62
SCUBE1Q8IWY4 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
SCUBE1Q8IWY4 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SCUBE1Q8IWY4 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SCUBE1Q8IWY4 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.15■■□□□ 1.62
SCUBE1Q8IWY4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SCUBE1Q8IWY4 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SCUBE1Q8IWY4 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.15■■□□□ 1.62
SCUBE1Q8IWY4 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
SCUBE1Q8IWY4 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.62
SCUBE1Q8IWY4 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.14■■□□□ 1.62
SCUBE1Q8IWY4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SCUBE1Q8IWY4 AP006261.1-201ENST00000584783 668 ntBASIC25.14■■□□□ 1.62
SCUBE1Q8IWY4 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
SCUBE1Q8IWY4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
SCUBE1Q8IWY4 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
SCUBE1Q8IWY4 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms