Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SFTPA1Q8IWL2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
SFTPA1Q8IWL2 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.65■■□□□ 1.86
SFTPA1Q8IWL2 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.64■■□□□ 1.86
SFTPA1Q8IWL2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.64■■□□□ 1.86
SFTPA1Q8IWL2 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
SFTPA1Q8IWL2 LINC00273-201ENST00000539813 1452 ntBASIC26.63■■□□□ 1.85
SFTPA1Q8IWL2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.63■■□□□ 1.85
SFTPA1Q8IWL2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.63■■□□□ 1.85
SFTPA1Q8IWL2 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
SFTPA1Q8IWL2 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
SFTPA1Q8IWL2 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SFTPA1Q8IWL2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.62■■□□□ 1.85
SFTPA1Q8IWL2 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SFTPA1Q8IWL2 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SFTPA1Q8IWL2 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SFTPA1Q8IWL2 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SFTPA1Q8IWL2 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.6■■□□□ 1.85
SFTPA1Q8IWL2 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SFTPA1Q8IWL2 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
SFTPA1Q8IWL2 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SFTPA1Q8IWL2 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
SFTPA1Q8IWL2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SFTPA1Q8IWL2 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SFTPA1Q8IWL2 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SFTPA1Q8IWL2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SFTPA1Q8IWL2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.57■■□□□ 1.84
SFTPA1Q8IWL2 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
SFTPA1Q8IWL2 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SFTPA1Q8IWL2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SFTPA1Q8IWL2 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
SFTPA1Q8IWL2 AC127502.1-201ENST00000399971 1502 ntBASIC26.55■■□□□ 1.84
SFTPA1Q8IWL2 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SFTPA1Q8IWL2 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
SFTPA1Q8IWL2 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SFTPA1Q8IWL2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
SFTPA1Q8IWL2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
SFTPA1Q8IWL2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
SFTPA1Q8IWL2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.52■■□□□ 1.84
SFTPA1Q8IWL2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.52■■□□□ 1.84
SFTPA1Q8IWL2 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SFTPA1Q8IWL2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.51■■□□□ 1.83
SFTPA1Q8IWL2 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SFTPA1Q8IWL2 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
SFTPA1Q8IWL2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
SFTPA1Q8IWL2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.5■■□□□ 1.83
SFTPA1Q8IWL2 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.5■■□□□ 1.83
SFTPA1Q8IWL2 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.5■■□□□ 1.83
SFTPA1Q8IWL2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.49■■□□□ 1.83
SFTPA1Q8IWL2 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
SFTPA1Q8IWL2 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.49■■□□□ 1.83
SFTPA1Q8IWL2 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SFTPA1Q8IWL2 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
SFTPA1Q8IWL2 AL135925.1-201ENST00000605920 1701 ntBASIC26.48■■□□□ 1.83
SFTPA1Q8IWL2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
SFTPA1Q8IWL2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.47■■□□□ 1.83
SFTPA1Q8IWL2 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SFTPA1Q8IWL2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.46■■□□□ 1.83
SFTPA1Q8IWL2 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SFTPA1Q8IWL2 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.46■■□□□ 1.83
SFTPA1Q8IWL2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.46■■□□□ 1.83
SFTPA1Q8IWL2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SFTPA1Q8IWL2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SFTPA1Q8IWL2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SFTPA1Q8IWL2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SFTPA1Q8IWL2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SFTPA1Q8IWL2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
SFTPA1Q8IWL2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
SFTPA1Q8IWL2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
SFTPA1Q8IWL2 WHAMMP2-203ENST00000563942 1603 ntBASIC26.45■■□□□ 1.82
SFTPA1Q8IWL2 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.44■■□□□ 1.82
SFTPA1Q8IWL2 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SFTPA1Q8IWL2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
SFTPA1Q8IWL2 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SFTPA1Q8IWL2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
SFTPA1Q8IWL2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SFTPA1Q8IWL2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SFTPA1Q8IWL2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SFTPA1Q8IWL2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SFTPA1Q8IWL2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SFTPA1Q8IWL2 AC135983.2-203ENST00000454486 1613 ntBASIC26.42■■□□□ 1.82
SFTPA1Q8IWL2 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SFTPA1Q8IWL2 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
SFTPA1Q8IWL2 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SFTPA1Q8IWL2 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
SFTPA1Q8IWL2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.4■■□□□ 1.82
SFTPA1Q8IWL2 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
SFTPA1Q8IWL2 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.39■■□□□ 1.82
SFTPA1Q8IWL2 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
SFTPA1Q8IWL2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.39■■□□□ 1.81
SFTPA1Q8IWL2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
SFTPA1Q8IWL2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
SFTPA1Q8IWL2 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.38■■□□□ 1.81
SFTPA1Q8IWL2 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.38■■□□□ 1.81
SFTPA1Q8IWL2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.38■■□□□ 1.81
SFTPA1Q8IWL2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
SFTPA1Q8IWL2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC26.37■■□□□ 1.81
SFTPA1Q8IWL2 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
SFTPA1Q8IWL2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
SFTPA1Q8IWL2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms