Protein–RNA interactions for Protein: Q6PJ69

TRIM65, Tripartite motif-containing protein 65, humanhuman

Predictions only

Length 517 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65Q6PJ69 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
TRIM65Q6PJ69 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
TRIM65Q6PJ69 AL121749.1-202ENST00000609313 2153 ntBASIC28.44■■■□□ 2.14
TRIM65Q6PJ69 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
TRIM65Q6PJ69 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
TRIM65Q6PJ69 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC28.42■■■□□ 2.14
TRIM65Q6PJ69 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
TRIM65Q6PJ69 DRD5P2-201ENST00000421395 2012 ntBASIC28.41■■■□□ 2.14
TRIM65Q6PJ69 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
TRIM65Q6PJ69 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
TRIM65Q6PJ69 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
TRIM65Q6PJ69 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC28.4■■■□□ 2.14
TRIM65Q6PJ69 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC28.4■■■□□ 2.14
TRIM65Q6PJ69 AL139393.2-201ENST00000608721 2025 ntBASIC28.4■■■□□ 2.14
TRIM65Q6PJ69 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
TRIM65Q6PJ69 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC28.39■■■□□ 2.14
TRIM65Q6PJ69 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
TRIM65Q6PJ69 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
TRIM65Q6PJ69 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC28.38■■■□□ 2.13
TRIM65Q6PJ69 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
TRIM65Q6PJ69 SUZ12P1-203ENST00000578195 985 ntBASIC28.38■■■□□ 2.13
TRIM65Q6PJ69 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
TRIM65Q6PJ69 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
TRIM65Q6PJ69 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TRIM65Q6PJ69 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
TRIM65Q6PJ69 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
TRIM65Q6PJ69 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
TRIM65Q6PJ69 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC28.35■■■□□ 2.13
TRIM65Q6PJ69 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
TRIM65Q6PJ69 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
TRIM65Q6PJ69 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC28.34■■■□□ 2.13
TRIM65Q6PJ69 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
TRIM65Q6PJ69 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
TRIM65Q6PJ69 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
TRIM65Q6PJ69 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TRIM65Q6PJ69 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TRIM65Q6PJ69 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TRIM65Q6PJ69 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
TRIM65Q6PJ69 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
TRIM65Q6PJ69 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
TRIM65Q6PJ69 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TRIM65Q6PJ69 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TRIM65Q6PJ69 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
TRIM65Q6PJ69 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
TRIM65Q6PJ69 MIR762-201ENST00000390236 83 ntBASIC28.3■■■□□ 2.12
TRIM65Q6PJ69 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
TRIM65Q6PJ69 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC28.29■■■□□ 2.12
TRIM65Q6PJ69 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC28.29■■■□□ 2.12
TRIM65Q6PJ69 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
TRIM65Q6PJ69 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC28.28■■■□□ 2.12
TRIM65Q6PJ69 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
TRIM65Q6PJ69 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
TRIM65Q6PJ69 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
TRIM65Q6PJ69 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC28.27■■■□□ 2.12
TRIM65Q6PJ69 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC28.27■■■□□ 2.12
TRIM65Q6PJ69 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
TRIM65Q6PJ69 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC28.26■■■□□ 2.11
TRIM65Q6PJ69 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
TRIM65Q6PJ69 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TRIM65Q6PJ69 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TRIM65Q6PJ69 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
TRIM65Q6PJ69 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
TRIM65Q6PJ69 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TRIM65Q6PJ69 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
TRIM65Q6PJ69 CHML-205ENST00000638160 705 ntTSL 3 BASIC28.24■■■□□ 2.11
TRIM65Q6PJ69 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
TRIM65Q6PJ69 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
TRIM65Q6PJ69 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
TRIM65Q6PJ69 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC28.23■■■□□ 2.11
TRIM65Q6PJ69 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
TRIM65Q6PJ69 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC28.22■■■□□ 2.11
TRIM65Q6PJ69 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TRIM65Q6PJ69 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC28.22■■■□□ 2.11
TRIM65Q6PJ69 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC28.22■■■□□ 2.11
TRIM65Q6PJ69 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
TRIM65Q6PJ69 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC28.21■■■□□ 2.11
TRIM65Q6PJ69 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TRIM65Q6PJ69 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
TRIM65Q6PJ69 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
TRIM65Q6PJ69 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC28.2■■■□□ 2.1
TRIM65Q6PJ69 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
TRIM65Q6PJ69 SHF-207ENST00000560540 2062 ntTSL 5 BASIC28.2■■■□□ 2.1
TRIM65Q6PJ69 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC28.19■■■□□ 2.1
TRIM65Q6PJ69 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TRIM65Q6PJ69 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TRIM65Q6PJ69 HNRNPLP2-201ENST00000568980 1570 ntBASIC28.19■■■□□ 2.1
TRIM65Q6PJ69 AC135731.1-201ENST00000569415 2548 ntBASIC28.19■■■□□ 2.1
TRIM65Q6PJ69 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TRIM65Q6PJ69 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
TRIM65Q6PJ69 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
TRIM65Q6PJ69 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRIM65Q6PJ69 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRIM65Q6PJ69 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRIM65Q6PJ69 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC28.16■■■□□ 2.1
TRIM65Q6PJ69 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC28.16■■■□□ 2.1
TRIM65Q6PJ69 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
TRIM65Q6PJ69 CREM-210ENST00000374721 2020 ntTSL 5 BASIC28.16■■■□□ 2.1
TRIM65Q6PJ69 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TRIM65Q6PJ69 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
TRIM65Q6PJ69 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms