Protein–RNA interactions for Protein: Q6PJ69

TRIM65, Tripartite motif-containing protein 65, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65Q6PJ69 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
TRIM65Q6PJ69 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
TRIM65Q6PJ69 AL121749.1-202ENST00000609313 2153 ntBASIC28.44■■■□□ 2.14
TRIM65Q6PJ69 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
TRIM65Q6PJ69 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
TRIM65Q6PJ69 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC28.42■■■□□ 2.14
TRIM65Q6PJ69 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
TRIM65Q6PJ69 DRD5P2-201ENST00000421395 2012 ntBASIC28.41■■■□□ 2.14
TRIM65Q6PJ69 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
TRIM65Q6PJ69 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
TRIM65Q6PJ69 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
TRIM65Q6PJ69 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC28.4■■■□□ 2.14
TRIM65Q6PJ69 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC28.4■■■□□ 2.14
TRIM65Q6PJ69 AL139393.2-201ENST00000608721 2025 ntBASIC28.4■■■□□ 2.14
TRIM65Q6PJ69 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
TRIM65Q6PJ69 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC28.39■■■□□ 2.14
TRIM65Q6PJ69 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
TRIM65Q6PJ69 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
TRIM65Q6PJ69 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC28.38■■■□□ 2.13
TRIM65Q6PJ69 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
TRIM65Q6PJ69 SUZ12P1-203ENST00000578195 985 ntBASIC28.38■■■□□ 2.13
TRIM65Q6PJ69 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
TRIM65Q6PJ69 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
TRIM65Q6PJ69 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TRIM65Q6PJ69 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
TRIM65Q6PJ69 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
TRIM65Q6PJ69 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
TRIM65Q6PJ69 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC28.35■■■□□ 2.13
TRIM65Q6PJ69 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
TRIM65Q6PJ69 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
TRIM65Q6PJ69 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC28.34■■■□□ 2.13
TRIM65Q6PJ69 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
TRIM65Q6PJ69 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
TRIM65Q6PJ69 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
TRIM65Q6PJ69 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TRIM65Q6PJ69 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TRIM65Q6PJ69 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TRIM65Q6PJ69 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
TRIM65Q6PJ69 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
TRIM65Q6PJ69 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
TRIM65Q6PJ69 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TRIM65Q6PJ69 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TRIM65Q6PJ69 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
TRIM65Q6PJ69 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
TRIM65Q6PJ69 MIR762-201ENST00000390236 83 ntBASIC28.3■■■□□ 2.12
TRIM65Q6PJ69 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
TRIM65Q6PJ69 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC28.29■■■□□ 2.12
TRIM65Q6PJ69 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC28.29■■■□□ 2.12
TRIM65Q6PJ69 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
TRIM65Q6PJ69 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC28.28■■■□□ 2.12
TRIM65Q6PJ69 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
TRIM65Q6PJ69 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
TRIM65Q6PJ69 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
TRIM65Q6PJ69 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC28.27■■■□□ 2.12
TRIM65Q6PJ69 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC28.27■■■□□ 2.12
TRIM65Q6PJ69 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
TRIM65Q6PJ69 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC28.26■■■□□ 2.11
TRIM65Q6PJ69 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
TRIM65Q6PJ69 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TRIM65Q6PJ69 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TRIM65Q6PJ69 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
TRIM65Q6PJ69 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
TRIM65Q6PJ69 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TRIM65Q6PJ69 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
TRIM65Q6PJ69 CHML-205ENST00000638160 705 ntTSL 3 BASIC28.24■■■□□ 2.11
TRIM65Q6PJ69 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
TRIM65Q6PJ69 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
TRIM65Q6PJ69 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
TRIM65Q6PJ69 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC28.23■■■□□ 2.11
TRIM65Q6PJ69 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
TRIM65Q6PJ69 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC28.22■■■□□ 2.11
TRIM65Q6PJ69 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TRIM65Q6PJ69 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC28.22■■■□□ 2.11
TRIM65Q6PJ69 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC28.22■■■□□ 2.11
TRIM65Q6PJ69 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
TRIM65Q6PJ69 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC28.21■■■□□ 2.11
TRIM65Q6PJ69 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TRIM65Q6PJ69 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
TRIM65Q6PJ69 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
TRIM65Q6PJ69 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC28.2■■■□□ 2.1
TRIM65Q6PJ69 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
TRIM65Q6PJ69 SHF-207ENST00000560540 2062 ntTSL 5 BASIC28.2■■■□□ 2.1
TRIM65Q6PJ69 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC28.19■■■□□ 2.1
TRIM65Q6PJ69 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TRIM65Q6PJ69 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TRIM65Q6PJ69 HNRNPLP2-201ENST00000568980 1570 ntBASIC28.19■■■□□ 2.1
TRIM65Q6PJ69 AC135731.1-201ENST00000569415 2548 ntBASIC28.19■■■□□ 2.1
TRIM65Q6PJ69 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TRIM65Q6PJ69 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
TRIM65Q6PJ69 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
TRIM65Q6PJ69 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRIM65Q6PJ69 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRIM65Q6PJ69 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRIM65Q6PJ69 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC28.16■■■□□ 2.1
TRIM65Q6PJ69 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC28.16■■■□□ 2.1
TRIM65Q6PJ69 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
TRIM65Q6PJ69 CREM-210ENST00000374721 2020 ntTSL 5 BASIC28.16■■■□□ 2.1
TRIM65Q6PJ69 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TRIM65Q6PJ69 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
TRIM65Q6PJ69 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms