Protein–RNA interactions for Protein: Q01844

EWSR1, RNA-binding protein EWS, humanhuman

Known RBP eCLIP

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1Q01844 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.084e-7■■■■■ 31.7
EWSR1Q01844 SLC7A5-203ENST00000565644 3983 ntTSL 1 (best) BASIC9.72□□□□□ -0.854e-7■■■■■ 31.7
EWSR1Q01844 SDF4-207ENST00000494748 3516 ntTSL 213.38□□□□□ -0.276e-9■■■■■ 31.6
EWSR1Q01844 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.94■□□□□ 0.33e-7■■■■■ 31.5
EWSR1Q01844 RNF213-201ENST00000319921 5316 ntTSL 1 (best) BASIC10.6□□□□□ -0.712e-7■■■■■ 31.5
EWSR1Q01844 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.412e-7■■■■■ 31.5
EWSR1Q01844 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.622e-7■■■■■ 31.5
EWSR1Q01844 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC14.62□□□□□ -0.077e-7■■■■■ 31.5
EWSR1Q01844 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.643e-7■■■■■ 31.5
EWSR1Q01844 GNPTG-205ENST00000527168 1317 ntTSL 517.1■□□□□ 0.333e-7■■■■■ 31.5
EWSR1Q01844 GNPTG-208ENST00000529957 922 ntTSL 516.4■□□□□ 0.223e-7■■■■■ 31.5
EWSR1Q01844 GNPTG-206ENST00000527876 550 ntTSL 416.22■□□□□ 0.193e-7■■■■■ 31.5
EWSR1Q01844 GNPTG-207ENST00000529110 552 ntTSL 216.12■□□□□ 0.173e-7■■■■■ 31.5
EWSR1Q01844 GNPTG-202ENST00000526820 572 ntTSL 314.26□□□□□ -0.133e-7■■■■■ 31.5
EWSR1Q01844 LIG4-202ENST00000405925 4065 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.193e-6■■■■■ 31.4
EWSR1Q01844 GAK-212ENST00000510022 618 ntTSL 48.22□□□□□ -1.098e-8■■■■■ 31.4
EWSR1Q01844 GAK-215ENST00000511229 568 ntTSL 35.18□□□□□ -1.588e-8■■■■■ 31.4
EWSR1Q01844 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.119e-7■■■■■ 31.3
EWSR1Q01844 PIAS4-202ENST00000593518 555 ntTSL 49□□□□□ -0.979e-7■■■■■ 31.3
EWSR1Q01844 PIAS4-205ENST00000600566 624 ntTSL 27.26□□□□□ -1.259e-7■■■■■ 31.3
EWSR1Q01844 PIAS4-204ENST00000599999 581 ntTSL 37.26□□□□□ -1.259e-7■■■■■ 31.3
EWSR1Q01844 MXI1-207ENST00000453116 803 ntTSL 517.92■□□□□ 0.466e-8■■■■■ 31.2
EWSR1Q01844 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.176e-8■■■■■ 31.2
EWSR1Q01844 DNM2-207ENST00000586939 551 ntTSL 49.7□□□□□ -0.862e-7■■■■■ 31.2
EWSR1Q01844 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.15e-7■■■■■ 31.2
EWSR1Q01844 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.435e-7■■■■■ 31.2
EWSR1Q01844 KDM6B-204ENST00000571047 362 ntTSL 57.83□□□□□ -1.165e-7■■■■■ 31.2
EWSR1Q01844 ALOX12-AS1-205ENST00000572385 576 ntTSL 49.68□□□□□ -0.863e-7■■■■■ 31.1
EWSR1Q01844 ALOX12-AS1-203ENST00000570562 567 ntTSL 3 BASIC8.36□□□□□ -1.073e-7■■■■■ 31.1
EWSR1Q01844 ALOX12-AS1-209ENST00000575889 439 ntTSL 3 BASIC8.13□□□□□ -1.113e-7■■■■■ 31.1
EWSR1Q01844 SRSF6-202ENST00000483871 1680 ntTSL 210.9□□□□□ -0.666e-11■■■■■ 31
EWSR1Q01844 SRSF6-201ENST00000244020 4325 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.116e-11■■■■■ 31
EWSR1Q01844 PIP5K1C-208ENST00000637724 435 ntTSL 314.91□□□□□ -0.025e-7■■■■■ 30.8
EWSR1Q01844 CARHSP1-215ENST00000570125 681 ntTSL 420.72■□□□□ 0.911e-6■■■■■ 30.8
EWSR1Q01844 CARHSP1-206ENST00000563815 1913 ntTSL 216.2■□□□□ 0.181e-6■■■■■ 30.8
EWSR1Q01844 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.77■□□□□ 0.111e-6■■■■■ 30.8
EWSR1Q01844 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31e-6■■■■■ 30.8
EWSR1Q01844 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC13.1□□□□□ -0.311e-6■■■■■ 30.8
EWSR1Q01844 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.441e-6■■■■■ 30.8
EWSR1Q01844 CARHSP1-204ENST00000562586 578 ntTSL 211.79□□□□□ -0.521e-6■■■■■ 30.8
EWSR1Q01844 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.571e-6■■■■■ 30.8
EWSR1Q01844 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.651e-6■■■■■ 30.8
EWSR1Q01844 CARHSP1-214ENST00000569572 578 ntTSL 310.53□□□□□ -0.721e-6■■■■■ 30.8
EWSR1Q01844 CARHSP1-207ENST00000565287 556 ntTSL 310.48□□□□□ -0.731e-6■■■■■ 30.8
EWSR1Q01844 CARHSP1-210ENST00000567908 565 ntTSL 210.21□□□□□ -0.771e-6■■■■■ 30.8
EWSR1Q01844 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.09□□□□□ -0.314e-7■■■■■ 30.8
EWSR1Q01844 LINC01237-205ENST00000457686 586 ntTSL 411.98□□□□□ -0.494e-7■■■■■ 30.8
EWSR1Q01844 LINC01237-202ENST00000429947 470 ntTSL 410.49□□□□□ -0.734e-7■■■■■ 30.8
EWSR1Q01844 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.34■■□□□ 1.013e-8■■■■■ 30.8
EWSR1Q01844 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.17■□□□□ 0.54e-6■■■■■ 30.8
EWSR1Q01844 GABBR1-207ENST00000467259 1252 ntTSL 217.66■□□□□ 0.423e-8■■■■■ 30.8
EWSR1Q01844 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.372e-6■■■■■ 30.8
EWSR1Q01844 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.61■□□□□ 0.253e-8■■■■■ 30.8
EWSR1Q01844 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.243e-8■■■■■ 30.8
EWSR1Q01844 GABBR1-208ENST00000472823 4286 ntTSL 516.44■□□□□ 0.223e-8■■■■■ 30.8
EWSR1Q01844 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.02■□□□□ 0.153e-8■■■■■ 30.8
EWSR1Q01844 GABBR1-210ENST00000476670 487 ntTSL 415.56■□□□□ 0.083e-8■■■■■ 30.8
EWSR1Q01844 LMF1-204ENST00000562226 1088 ntTSL 215.15■□□□□ 0.024e-6■■■■■ 30.8
EWSR1Q01844 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.023e-8■■■■■ 30.8
EWSR1Q01844 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC14.74□□□□□ -0.054e-6■■■■■ 30.8
EWSR1Q01844 MEF2D-205ENST00000475587 1627 ntTSL 514.65□□□□□ -0.063e-8■■■■■ 30.8
EWSR1Q01844 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.074e-6■■■■■ 30.8
EWSR1Q01844 LMF1-213ENST00000568964 853 ntTSL 214.16□□□□□ -0.144e-6■■■■■ 30.8
EWSR1Q01844 LMF1-203ENST00000545827 2731 ntTSL 214.03□□□□□ -0.164e-6■■■■■ 30.8
EWSR1Q01844 MEF2D-206ENST00000489057 593 ntTSL 513.36□□□□□ -0.273e-8■■■■■ 30.8
EWSR1Q01844 LMF1-210ENST00000567595 663 ntTSL 313.15□□□□□ -0.34e-6■■■■■ 30.8
EWSR1Q01844 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.353e-8■■■■■ 30.8
EWSR1Q01844 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC12.22□□□□□ -0.453e-8■■■■■ 30.8
EWSR1Q01844 LMF1-215ENST00000570014 882 ntTSL 512.15□□□□□ -0.464e-6■■■■■ 30.8
EWSR1Q01844 LMF1-209ENST00000566627 694 ntTSL 312.07□□□□□ -0.484e-6■■■■■ 30.8
EWSR1Q01844 GABBR1-218ENST00000491829 4212 ntTSL 511.86□□□□□ -0.513e-8■■■■■ 30.8
EWSR1Q01844 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC11.41□□□□□ -0.582e-6■■■■■ 30.8
EWSR1Q01844 SDC3-203ENST00000471567 589 ntTSL 311.35□□□□□ -0.593e-8■■■■■ 30.8
EWSR1Q01844 GABBR1-206ENST00000462632 609 ntTSL 410.48□□□□□ -0.733e-8■■■■■ 30.8
EWSR1Q01844 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC9.53□□□□□ -0.883e-8■■■■■ 30.8
EWSR1Q01844 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC9.23□□□□□ -0.933e-8■■■■■ 30.8
EWSR1Q01844 ST6GAL1-206ENST00000430309 504 ntTSL 46.75□□□□□ -1.333e-8■■■■■ 30.8
EWSR1Q01844 LMF1-205ENST00000562380 551 ntTSL 43.24□□□□□ -1.894e-6■■■■■ 30.8
EWSR1Q01844 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.492e-8■■■■■ 30.7
EWSR1Q01844 TMEM18-206ENST00000461640 844 ntTSL 316.57■□□□□ 0.242e-8■■■■■ 30.7
EWSR1Q01844 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC15.28■□□□□ 0.042e-8■■■■■ 30.7
EWSR1Q01844 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.042e-8■■■■■ 30.7
EWSR1Q01844 TNRC18-206ENST00000434361 577 ntTSL 311.8□□□□□ -0.522e-8■■■■■ 30.7
EWSR1Q01844 TMEM18-203ENST00000405941 654 ntAPPRIS ALT2 TSL 3 BASIC9.03□□□□□ -0.962e-8■■■■■ 30.7
EWSR1Q01844 RASA3-202ENST00000542651 975 ntTSL 510.51□□□□□ -0.734e-7■■■■■ 30.6
EWSR1Q01844 GET4-206ENST00000464468 676 ntTSL 312.76□□□□□ -0.371e-7■■■■■ 30.5
EWSR1Q01844 MTG1-204ENST00000473735 2212 ntTSL 518.43■□□□□ 0.542e-7■■■■■ 30.5
EWSR1Q01844 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.012e-7■■■■■ 30.5
EWSR1Q01844 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.172e-7■■■■■ 30.5
EWSR1Q01844 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.222e-7■■■■■ 30.5
EWSR1Q01844 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC13.33□□□□□ -0.282e-7■■■■■ 30.5
EWSR1Q01844 MTG1-202ENST00000432508 953 ntTSL 213.03□□□□□ -0.322e-7■■■■■ 30.5
EWSR1Q01844 PTP4A1-202ENST00000470661 479 ntTSL 24.93□□□□□ -1.622e-7■■■■■ 30.5
EWSR1Q01844 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.49□□□□□ -2.172e-7■■■■■ 30.5
EWSR1Q01844 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.057e-8■■■■■ 30.5
EWSR1Q01844 MXI1-208ENST00000460667 782 ntTSL 317.53■□□□□ 0.47e-8■■■■■ 30.5
EWSR1Q01844 MXI1-205ENST00000393134 889 ntTSL 2 BASIC11.5□□□□□ -0.577e-8■■■■■ 30.5
EWSR1Q01844 MXI1-209ENST00000484030 838 ntTSL 55.44□□□□□ -1.547e-8■■■■■ 30.5
EWSR1Q01844 PTK2-225ENST00000520892 571 ntTSL 4 BASIC10.18□□□□□ -0.782e-6■■■■■ 30.5
EWSR1Q01844 PTK2-234ENST00000521791 556 ntTSL 46.3□□□□□ -1.42e-6■■■■■ 30.5
Retrieved 100 of 7,101 protein–RNA pairs in 28 ms