Protein–RNA interactions for Protein: P36534

MRPL40, 54S ribosomal protein L40, mitochondrial, yeastyeast

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MRPL40P36534 MOB1YIL106W 945 nt8.55□□□□□ -1.04
MRPL40P36534 CYC3YAL039C 810 nt8.55□□□□□ -1.04
MRPL40P36534 snR31snR31 225 nt8.55□□□□□ -1.04
MRPL40P36534 NAM8YHR086W 1572 nt8.54□□□□□ -1.04
MRPL40P36534 YKR012CYKR012C 378 nt8.54□□□□□ -1.04
MRPL40P36534 VMA11YPL234C 495 nt8.54□□□□□ -1.04
MRPL40P36534 MDL2YPL270W 2322 nt8.53□□□□□ -1.04
MRPL40P36534 YMR265CYMR265C 1386 nt8.53□□□□□ -1.04
MRPL40P36534 RPN14YGL004C 1254 nt8.53□□□□□ -1.04
MRPL40P36534 GID8YMR135C 1368 nt8.52□□□□□ -1.05
MRPL40P36534 HAP5YOR358W 729 nt8.52□□□□□ -1.05
MRPL40P36534 SGA1YIL099W 1650 nt8.51□□□□□ -1.05
MRPL40P36534 HIS2YFR025C 1008 nt8.51□□□□□ -1.05
MRPL40P36534 LYS20YDL182W 1287 nt8.5□□□□□ -1.05
MRPL40P36534 SWM1YDR260C 513 nt8.5□□□□□ -1.05
MRPL40P36534 YER152W-AYER152W-A 567 nt8.5□□□□□ -1.05
MRPL40P36534 SER2YGR208W 930 nt8.5□□□□□ -1.05
MRPL40P36534 RCR1YBR005W 642 nt8.5□□□□□ -1.05
MRPL40P36534 SDS24YBR214W 1584 nt8.5□□□□□ -1.05
MRPL40P36534 THI6YPL214C 1623 nt8.5□□□□□ -1.05
MRPL40P36534 MET1YKR069W 1782 nt8.49□□□□□ -1.05
MRPL40P36534 REX2YLR059C 810 nt8.49□□□□□ -1.05
MRPL40P36534 YMR007WYMR007W 381 nt8.49□□□□□ -1.05
MRPL40P36534 ENO1YGR254W 1314 nt8.49□□□□□ -1.05
MRPL40P36534 SUV3YPL029W 2214 nt8.49□□□□□ -1.05
MRPL40P36534 SRP102YKL154W 735 nt8.48□□□□□ -1.05
MRPL40P36534 YHR219WYHR219W 1875 nt8.48□□□□□ -1.05
MRPL40P36534 LPD1YFL018C 1500 nt8.48□□□□□ -1.05
MRPL40P36534 ALR1YOL130W 2580 nt8.48□□□□□ -1.05
MRPL40P36534 YKL133CYKL133C 1392 nt8.48□□□□□ -1.05
MRPL40P36534 HTS1YPR033C 1641 nt8.47□□□□□ -1.05
MRPL40P36534 LSR1LSR1 1175 nt8.47□□□□□ -1.05
MRPL40P36534 MRS6YOR370C 1812 nt8.45□□□□□ -1.06
MRPL40P36534 SRP54YPR088C 1626 nt8.45□□□□□ -1.06
MRPL40P36534 SNX3YOR357C 489 nt8.45□□□□□ -1.06
MRPL40P36534 RPD3YNL330C 1302 nt8.45□□□□□ -1.06
MRPL40P36534 YDR306CYDR306C 1437 nt8.45□□□□□ -1.06
MRPL40P36534 YKL053WYKL053W 375 nt8.44□□□□□ -1.06
MRPL40P36534 BUD20YLR074C 501 nt8.44□□□□□ -1.06
MRPL40P36534 CRC1YOR100C 984 nt8.44□□□□□ -1.06
MRPL40P36534 VBA3YCL069W 1377 nt8.44□□□□□ -1.06
MRPL40P36534 YPT11YNL304W 1254 nt8.42□□□□□ -1.06
MRPL40P36534 MEX67YPL169C 1800 nt8.42□□□□□ -1.06
MRPL40P36534 ERO1YML130C 1692 nt8.41□□□□□ -1.06
MRPL40P36534 YLR280CYLR280C 351 nt8.41□□□□□ -1.06
MRPL40P36534 ZAP1YJL056C 2643 nt8.41□□□□□ -1.06
MRPL40P36534 GCD11YER025W 1584 nt8.4□□□□□ -1.06
MRPL40P36534 KRR1YCL059C 951 nt8.4□□□□□ -1.06
MRPL40P36534 CWP2YKL096W-A 279 nt8.4□□□□□ -1.06
MRPL40P36534 SAN1YDR143C 1833 nt8.39□□□□□ -1.07
MRPL40P36534 UGP1YKL035W 1500 nt8.39□□□□□ -1.07
MRPL40P36534 UFD1YGR048W 1086 nt8.38□□□□□ -1.07
MRPL40P36534 YGR210CYGR210C 1236 nt8.38□□□□□ -1.07
MRPL40P36534 GNP1YDR508C 1992 nt8.37□□□□□ -1.07
MRPL40P36534 YRF1-2YER190W 5046 nt8.36□□□□□ -1.07
MRPL40P36534 TGA1tA(UGC)A 73 nt8.35□□□□□ -1.07
MRPL40P36534 tA(UGC)EtA(UGC)E 73 nt8.35□□□□□ -1.07
MRPL40P36534 tA(UGC)GtA(UGC)G 73 nt8.35□□□□□ -1.07
MRPL40P36534 tA(UGC)LtA(UGC)L 73 nt8.35□□□□□ -1.07
MRPL40P36534 tA(UGC)OtA(UGC)O 73 nt8.35□□□□□ -1.07
MRPL40P36534 RIM2YBR192W 1134 nt8.35□□□□□ -1.07
MRPL40P36534 DMA2YNL116W 1569 nt8.35□□□□□ -1.07
MRPL40P36534 KGD2YDR148C 1392 nt8.35□□□□□ -1.07
MRPL40P36534 FCY1YPR062W 477 nt8.34□□□□□ -1.07
MRPL40P36534 DUR3YHL016C 2208 nt8.34□□□□□ -1.07
MRPL40P36534 YFR020WYFR020W 699 nt8.33□□□□□ -1.08
MRPL40P36534 SBP1YHL034C 885 nt8.33□□□□□ -1.08
MRPL40P36534 RSM7YJR113C 744 nt8.33□□□□□ -1.08
MRPL40P36534 RPC31YNL151C 756 nt8.33□□□□□ -1.08
MRPL40P36534 ADE2YOR128C 1716 nt8.33□□□□□ -1.08
MRPL40P36534 SSL2YIL143C 2532 nt8.32□□□□□ -1.08
MRPL40P36534 YPL108WYPL108W 507 nt8.32□□□□□ -1.08
MRPL40P36534 GAS1YMR307W 1680 nt8.32□□□□□ -1.08
MRPL40P36534 PTC6YCR079W 1329 nt8.3□□□□□ -1.08
MRPL40P36534 PUS7YOR243C 2031 nt8.29□□□□□ -1.08
MRPL40P36534 YOR343CYOR343C 327 nt8.29□□□□□ -1.08
MRPL40P36534 SNU66YOR308C 1764 nt8.29□□□□□ -1.08
MRPL40P36534 ODC1YPL134C 933 nt8.28□□□□□ -1.08
MRPL40P36534 ECM10YEL030W 1935 nt8.28□□□□□ -1.08
MRPL40P36534 RPL12BYDR418W 498 nt8.27□□□□□ -1.09
MRPL40P36534 HRA1HRA1 564 nt8.27□□□□□ -1.09
MRPL40P36534 PAU21YOR394W 495 nt8.26□□□□□ -1.09
MRPL40P36534 PAU22YPL282C 495 nt8.26□□□□□ -1.09
MRPL40P36534 GRH1YDR517W 1119 nt8.25□□□□□ -1.09
MRPL40P36534 YAL016C-AYAL016C-A 315 nt8.25□□□□□ -1.09
MRPL40P36534 YMR166CYMR166C 1107 nt8.25□□□□□ -1.09
MRPL40P36534 MAM3YOL060C 2121 nt8.25□□□□□ -1.09
MRPL40P36534 YLR460CYLR460C 1131 nt8.24□□□□□ -1.09
MRPL40P36534 FIT1YDR534C 1587 nt8.23□□□□□ -1.09
MRPL40P36534 GGA2YHR108W 1758 nt8.23□□□□□ -1.09
MRPL40P36534 YJL160CYJL160C 864 nt8.23□□□□□ -1.09
MRPL40P36534 YHR218WYHR218W 1812 nt8.23□□□□□ -1.09
MRPL40P36534 MDM35YKL053C-A 261 nt8.22□□□□□ -1.09
MRPL40P36534 MET30YIL046W 1923 nt8.22□□□□□ -1.09
MRPL40P36534 DPL1YDR294C 1770 nt8.22□□□□□ -1.09
MRPL40P36534 EMC3YKL207W 762 nt8.21□□□□□ -1.1
MRPL40P36534 LSP1YPL004C 1026 nt8.21□□□□□ -1.1
MRPL40P36534 YMR316C-BYMR316C-B 309 nt8.2□□□□□ -1.1
MRPL40P36534 YRF1-3YGR296W 5580 nt8.19□□□□□ -1.1
MRPL40P36534 YRF1-6YNL339C 5580 nt8.19□□□□□ -1.1
Retrieved 100 of 7,029 protein–RNA pairs in 15.9 ms