RNA–Protein interactions for RNA: YER025W

GCD11, Transcript of Gamma subunit of the translation initiation factor eIF2, yeastyeast

Gene GCD11, Length 1,584 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GCD11YER025W DRS1P32892 752 aaKnown RBP14.72□□□□□ -0.05
GCD11YER025W MTC1P47018 478 aaKnown RBP14.22□□□□□ -0.13
GCD11YER025W RQC2Q12532 1038 aaKnown RBP13.17□□□□□ -0.3
GCD11YER025W BFR2Q06631 534 aaKnown RBP12.9□□□□□ -0.35
GCD11YER025W TFA1P36100 482 aa12.43□□□□□ -0.42
GCD11YER025W DIP2Q12220 943 aaPredicted RBP12.39□□□□□ -0.43
GCD11YER025W AVT3P36062 692 aa12.37□□□□□ -0.43
GCD11YER025W TAF7Q05021 590 aa12.13□□□□□ -0.47
GCD11YER025W URN1Q06525 465 aaKnown RBP11.68□□□□□ -0.54
GCD11YER025W RSE1Q04693 1361 aaKnown RBP11.53□□□□□ -0.56
GCD11YER025W ISW2Q08773 1120 aa11.41□□□□□ -0.58
GCD11YER025W RPG1P38249 964 aaKnown RBP11.33□□□□□ -0.6
GCD11YER025W PRI1P10363 409 aa11.2□□□□□ -0.62
GCD11YER025W FAP1P53971 965 aa11.18□□□□□ -0.62
GCD11YER025W RPL17AP05740 184 aaKnown RBP11.11□□□□□ -0.63
GCD11YER025W RPL17BP46990 184 aaKnown RBP11.11□□□□□ -0.63
GCD11YER025W SIS2P36024 562 aa11.09□□□□□ -0.63
GCD11YER025W EBP2P36049 427 aaKnown RBP11.02□□□□□ -0.65
GCD11YER025W CAB3P36076 571 aa10.9□□□□□ -0.66
GCD11YER025W AAD16Q02895 342 aa10.9□□□□□ -0.66
GCD11YER025W REB1P21538 810 aa10.9□□□□□ -0.67
GCD11YER025W YFR016CP43597 1233 aaKnown RBP10.82□□□□□ -0.68
GCD11YER025W SPT21P35209 758 aa10.78□□□□□ -0.68
GCD11YER025W YRB30P53107 440 aaPredicted RBP10.73□□□□□ -0.69
GCD11YER025W NOP2P40991 618 aaKnown RBP10.73□□□□□ -0.69
GCD11YER025W TSR3Q12094 313 aaKnown RBP10.7□□□□□ -0.7
GCD11YER025W RIM101P33400 625 aa10.69□□□□□ -0.7
GCD11YER025W NAP1P25293 417 aaKnown RBP10.68□□□□□ -0.7
GCD11YER025W IOC4Q04213 475 aa10.65□□□□□ -0.71
GCD11YER025W PTP3P40048 928 aa10.62□□□□□ -0.71
GCD11YER025W RPS0BP46654 252 aaKnown RBP10.6□□□□□ -0.71
GCD11YER025W KRI1P42846 591 aaKnown RBP10.55□□□□□ -0.72
GCD11YER025W LEO1P38439 464 aa10.48□□□□□ -0.73
GCD11YER025W PRY3P47033 881 aa10.46□□□□□ -0.74
GCD11YER025W OXP1P28273 1286 aa10.43□□□□□ -0.74
GCD11YER025W DMA1P38823 416 aa10.43□□□□□ -0.74
GCD11YER025W SSP1P38871 571 aa10.38□□□□□ -0.75
GCD11YER025W AIM44Q99299 758 aa10.36□□□□□ -0.75
GCD11YER025W YKR023WP36119 530 aaKnown RBP10.35□□□□□ -0.75
GCD11YER025W YAH1Q12184 172 aaKnown RBP10.31□□□□□ -0.76
GCD11YER025W MNN4P36044 1178 aa10.26□□□□□ -0.77
GCD11YER025W CWC22P53333 577 aaKnown RBP10.26□□□□□ -0.77
GCD11YER025W YLR271WQ06152 274 aa10.2□□□□□ -0.78
GCD11YER025W MRPL32P25348 183 aa10.17□□□□□ -0.78
GCD11YER025W SNU71P53207 620 aaKnown RBP10.17□□□□□ -0.78
GCD11YER025W YPR148CQ06523 435 aa10.17□□□□□ -0.78
GCD11YER025W IFH1P39520 1085 aa10.16□□□□□ -0.78
GCD11YER025W YIL055CP40523 627 aaKnown RBP10.16□□□□□ -0.78
GCD11YER025W HOP09932 586 aa10.14□□□□□ -0.79
GCD11YER025W TOP1P04786 769 aa10.12□□□□□ -0.79
GCD11YER025W DCD1P06773 312 aa10.11□□□□□ -0.79
GCD11YER025W TFC8Q12308 588 aa10.1□□□□□ -0.79
GCD11YER025W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.09□□□□□ -0.79not detected
GCD11YER025W DEF1P35732 738 aaKnown RBP10.08□□□□□ -0.8
GCD11YER025W YCK3P39962 524 aa10.05□□□□□ -0.8
GCD11YER025W CDC27P38042 758 aa10.05□□□□□ -0.8
GCD11YER025W ORC1P54784 914 aaPredicted RBP10.05□□□□□ -0.8
GCD11YER025W RSM7P47150 247 aa10.04□□□□□ -0.8
GCD11YER025W MON2P48563 1636 aaPredicted RBP10.04□□□□□ -0.8
GCD11YER025W INO80P53115 1489 aa10.03□□□□□ -0.8
GCD11YER025W PSH1Q12161 406 aa10.02□□□□□ -0.81
GCD11YER025W MDG1P53885 366 aa9.99□□□□□ -0.81
GCD11YER025W SGS1P35187 1447 aa9.98□□□□□ -0.81
GCD11YER025W NSR1P27476 414 aaKnown RBP RIP-Chip data9.97□□□□□ -0.81not detected
GCD11YER025W RLP24Q07915 199 aaKnown RBP9.97□□□□□ -0.81
GCD11YER025W MGA2P40578 1113 aa9.95□□□□□ -0.82
GCD11YER025W ENV11P53246 860 aa9.95□□□□□ -0.82
GCD11YER025W CST9Q06032 482 aa9.94□□□□□ -0.82
GCD11YER025W NUG1P40010 520 aaKnown RBP9.87□□□□□ -0.83
GCD11YER025W AI2P03876 854 aa9.86□□□□□ -0.83
GCD11YER025W BCH2P36122 765 aa9.85□□□□□ -0.83
GCD11YER025W PSD2P53037 1138 aaKnown RBP9.85□□□□□ -0.83
GCD11YER025W TCB3Q03640 1545 aaKnown RBP9.83□□□□□ -0.84
GCD11YER025W TCB2P48231 1178 aa9.81□□□□□ -0.84
GCD11YER025W HAA1Q12753 694 aaKnown RBP9.81□□□□□ -0.84
GCD11YER025W TY1B-DR4Q07793 1604 aa9.79□□□□□ -0.84
GCD11YER025W NOP53Q12080 455 aaKnown RBP9.79□□□□□ -0.84
GCD11YER025W GIN4Q12263 1142 aa9.77□□□□□ -0.85
GCD11YER025W HIF1Q12373 385 aa9.77□□□□□ -0.85
GCD11YER025W SPT2P06843 333 aaPredicted RBP9.76□□□□□ -0.85
GCD11YER025W SPT7P35177 1332 aa9.76□□□□□ -0.85
GCD11YER025W RLF2Q12495 606 aa9.75□□□□□ -0.85
GCD11YER025W PLP2Q12017 286 aa9.75□□□□□ -0.85
GCD11YER025W HSP82P02829 709 aaKnown RBP9.74□□□□□ -0.85
GCD11YER025W SWE1P32944 819 aa9.73□□□□□ -0.85
GCD11YER025W SWR1Q05471 1514 aa9.73□□□□□ -0.85
GCD11YER025W TOA1P32773 286 aa9.72□□□□□ -0.85
GCD11YER025W RPN1P38764 993 aaKnown RBP9.71□□□□□ -0.86
GCD11YER025W SAS10Q12136 610 aaPredicted RBP9.71□□□□□ -0.86
GCD11YER025W FPR3P38911 411 aaKnown RBP9.7□□□□□ -0.86
GCD11YER025W TIF4632P39936 914 aaKnown RBP9.7□□□□□ -0.86
GCD11YER025W BRL1P38770 471 aa9.69□□□□□ -0.86
GCD11YER025W EPS1P40557 701 aa9.69□□□□□ -0.86
GCD11YER025W BBC1P47068 1157 aa9.69□□□□□ -0.86
GCD11YER025W RPS0AP32905 252 aaKnown RBP9.68□□□□□ -0.86
GCD11YER025W SUB1P54000 292 aaKnown RBP9.67□□□□□ -0.86
GCD11YER025W ENP1P38333 483 aaKnown RBP9.66□□□□□ -0.86
GCD11YER025W NHA1Q99271 985 aa9.65□□□□□ -0.86
GCD11YER025W ABP1P15891 592 aaKnown RBP9.63□□□□□ -0.87
GCD11YER025W TLG1Q03322 224 aa9.63□□□□□ -0.87
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms