RNA–Protein interactions for RNA: YPL270W

MDL2, Transcript of Mitochondrial inner membrane half-type ABC transporter, yeast

Gene MDL2, Length 2,322 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MDL2	YPL270W	RQC2	Q12532	1038 aa	Known RBP	12.86	□□□□□ -0.35
MDL2	YPL270W	BFR2	Q06631	534 aa	Known RBP	12.58	□□□□□ -0.4
MDL2	YPL270W	NOP2	P40991	618 aa	Known RBP	12.09	□□□□□ -0.47
MDL2	YPL270W	SPA2	P23201	1466 aa	Known RBP	11.92	□□□□□ -0.5
MDL2	YPL270W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	11.75	□□□□□ -0.53	not detected
MDL2	YPL270W	SKI3	P17883	1432 aa	Known RBP	11.73	□□□□□ -0.53
MDL2	YPL270W	SSN2	P38931	1420 aa		11.64	□□□□□ -0.55
MDL2	YPL270W	SGS1	P35187	1447 aa		11.59	□□□□□ -0.55
MDL2	YPL270W	EBP2	P36049	427 aa	Known RBP	11.56	□□□□□ -0.56
MDL2	YPL270W	CAB3	P36076	571 aa		11.54	□□□□□ -0.56
MDL2	YPL270W	URN1	Q06525	465 aa	Known RBP	11.5	□□□□□ -0.57
MDL2	YPL270W	TAF7	Q05021	590 aa		11.3	□□□□□ -0.6
MDL2	YPL270W	DRS1	P32892	752 aa	Known RBP	11.28	□□□□□ -0.6
MDL2	YPL270W	YPR148C	Q06523	435 aa		11.2	□□□□□ -0.62
MDL2	YPL270W	SIS2	P36024	562 aa		11.17	□□□□□ -0.62
MDL2	YPL270W	TCB3	Q03640	1545 aa	Known RBP	11.07	□□□□□ -0.64
MDL2	YPL270W	ENP1	P38333	483 aa	Known RBP	11.06	□□□□□ -0.64
MDL2	YPL270W	AVT3	P36062	692 aa		11.03	□□□□□ -0.64
MDL2	YPL270W	CHD1	P32657	1468 aa		10.99	□□□□□ -0.65
MDL2	YPL270W	INO80	P53115	1489 aa		10.99	□□□□□ -0.65
MDL2	YPL270W	MMS22	Q06164	1454 aa		10.99	□□□□□ -0.65
MDL2	YPL270W	UFD4	P33202	1483 aa		10.9	□□□□□ -0.66
MDL2	YPL270W	YFR016C	P43597	1233 aa	Known RBP	10.87	□□□□□ -0.67
MDL2	YPL270W	STH1	P32597	1359 aa		10.85	□□□□□ -0.67
MDL2	YPL270W	RSE1	Q04693	1361 aa	Known RBP	10.79	□□□□□ -0.68
MDL2	YPL270W	TCB2	P48231	1178 aa		10.78	□□□□□ -0.68
MDL2	YPL270W	MTC1	P47018	478 aa	Known RBP	10.78	□□□□□ -0.68
MDL2	YPL270W	XRN1	P22147	1528 aa	Known RBP	10.76	□□□□□ -0.69
MDL2	YPL270W	SPP41	P38904	1435 aa		10.76	□□□□□ -0.69
MDL2	YPL270W	TFA1	P36100	482 aa		10.73	□□□□□ -0.69
MDL2	YPL270W	SPT7	P35177	1332 aa		10.7	□□□□□ -0.7
MDL2	YPL270W	POL5	P39985	1022 aa	Known RBP	10.69	□□□□□ -0.7
MDL2	YPL270W	MON2	P48563	1636 aa	Predicted RBP	10.68	□□□□□ -0.7
MDL2	YPL270W	PRS1	P32895	427 aa	Known RBP	10.68	□□□□□ -0.7
MDL2	YPL270W	TRM732	Q03496	1420 aa		10.67	□□□□□ -0.7
MDL2	YPL270W	CLC1	P17891	233 aa		10.66	□□□□□ -0.7
MDL2	YPL270W	SEC3	P33332	1336 aa	Known RBP	10.65	□□□□□ -0.7
MDL2	YPL270W	MNN4	P36044	1178 aa		10.64	□□□□□ -0.71
MDL2	YPL270W	ECM5	Q03214	1411 aa		10.64	□□□□□ -0.71
MDL2	YPL270W	IME2	P32581	645 aa		10.63	□□□□□ -0.71
MDL2	YPL270W	IKI3	Q06706	1349 aa	Known RBP	10.63	□□□□□ -0.71
MDL2	YPL270W	LEO1	P38439	464 aa		10.54	□□□□□ -0.72
MDL2	YPL270W	RPS0B	P46654	252 aa	Known RBP	10.52	□□□□□ -0.72
MDL2	YPL270W	CWC22	P53333	577 aa	Known RBP	10.52	□□□□□ -0.73
MDL2	YPL270W	KRI1	P42846	591 aa	Known RBP	10.5	□□□□□ -0.73
MDL2	YPL270W	DIP2	Q12220	943 aa	Predicted RBP	10.5	□□□□□ -0.73
MDL2	YPL270W	OPY1	P38271	328 aa		10.47	□□□□□ -0.73
MDL2	YPL270W	CFT1	Q06632	1357 aa	Known RBP	10.44	□□□□□ -0.74
MDL2	YPL270W	SSM4	P40318	1319 aa		10.44	□□□□□ -0.74
MDL2	YPL270W	PEP1	P32319	1579 aa		10.44	□□□□□ -0.74
MDL2	YPL270W	AIM44	Q99299	758 aa		10.44	□□□□□ -0.74
MDL2	YPL270W	QCR6	P00127	147 aa		10.43	□□□□□ -0.74
MDL2	YPL270W	NUP170	P38181	1502 aa		10.42	□□□□□ -0.74
MDL2	YPL270W	MYO2	P19524	1574 aa	Known RBP	10.41	□□□□□ -0.74
MDL2	YPL270W	EAF7	P53911	425 aa	Known RBP	10.4	□□□□□ -0.74
MDL2	YPL270W	SAS10	Q12136	610 aa	Predicted RBP	10.4	□□□□□ -0.74
MDL2	YPL270W	BUD4	P47136	1447 aa		10.4	□□□□□ -0.75
MDL2	YPL270W	SRB8	P25648	1427 aa		10.38	□□□□□ -0.75
MDL2	YPL270W	PDR10	P51533	1564 aa		10.38	□□□□□ -0.75
MDL2	YPL270W	FPR3	P38911	411 aa	Known RBP	10.38	□□□□□ -0.75
MDL2	YPL270W	RLF2	Q12495	606 aa		10.36	□□□□□ -0.75
MDL2	YPL270W	YGR130C	P53278	816 aa		10.36	□□□□□ -0.75
MDL2	YPL270W	STU1	P38198	1513 aa		10.36	□□□□□ -0.75
MDL2	YPL270W	RPC31	P17890	251 aa		10.34	□□□□□ -0.75
MDL2	YPL270W	IOC4	Q04213	475 aa		10.34	□□□□□ -0.75
MDL2	YPL270W	RTT106	P40161	455 aa		10.33	□□□□□ -0.76
MDL2	YPL270W	SNF7	P39929	240 aa	Known RBP	10.33	□□□□□ -0.76
MDL2	YPL270W	NOP53	Q12080	455 aa	Known RBP	10.33	□□□□□ -0.76
MDL2	YPL270W	YLR419W	Q06698	1435 aa	Known RBP	10.32	□□□□□ -0.76
MDL2	YPL270W	TOP2	P06786	1428 aa	Known RBP	10.32	□□□□□ -0.76
MDL2	YPL270W	YTA7	P40340	1379 aa		10.3	□□□□□ -0.76
MDL2	YPL270W	LEU3	P08638	886 aa		10.28	□□□□□ -0.76
MDL2	YPL270W	YRB30	P53107	440 aa	Predicted RBP	10.26	□□□□□ -0.77
MDL2	YPL270W	SPT21	P35209	758 aa		10.25	□□□□□ -0.77
MDL2	YPL270W	NUG1	P40010	520 aa	Known RBP	10.25	□□□□□ -0.77
MDL2	YPL270W	MLP2	P40457	1679 aa		10.25	□□□□□ -0.77
MDL2	YPL270W	HSL1	P34244	1518 aa		10.25	□□□□□ -0.77
MDL2	YPL270W	ENV11	P53246	860 aa		10.24	□□□□□ -0.77
MDL2	YPL270W	SCC2	Q04002	1493 aa		10.24	□□□□□ -0.77
MDL2	YPL270W	THO2	P53552	1597 aa	Known RBP	10.22	□□□□□ -0.77
MDL2	YPL270W	PAF1	P38351	445 aa		10.22	□□□□□ -0.77
MDL2	YPL270W	ROX1	P25042	368 aa		10.21	□□□□□ -0.78
MDL2	YPL270W	NAP1	P25293	417 aa	Known RBP	10.21	□□□□□ -0.78
MDL2	YPL270W	PSD2	P53037	1138 aa	Known RBP	10.21	□□□□□ -0.78
MDL2	YPL270W	BPT1	P14772	1559 aa		10.2	□□□□□ -0.78
MDL2	YPL270W	POL1	P13382	1468 aa		10.19	□□□□□ -0.78
MDL2	YPL270W	MMS1	Q06211	1407 aa		10.18	□□□□□ -0.78
MDL2	YPL270W	REV3	P14284	1504 aa		10.17	□□□□□ -0.78
MDL2	YPL270W	SPT6	P23615	1451 aa	Known RBP	10.17	□□□□□ -0.78
MDL2	YPL270W	PAN1	P32521	1480 aa		10.17	□□□□□ -0.78
MDL2	YPL270W	TY1B-DR4	Q07793	1604 aa		10.17	□□□□□ -0.78
MDL2	YPL270W	SSK2	P53599	1579 aa		10.16	□□□□□ -0.78
MDL2	YPL270W	SIN3	P22579	1536 aa		10.16	□□□□□ -0.78
MDL2	YPL270W	SMC4	Q12267	1418 aa		10.16	□□□□□ -0.78
MDL2	YPL270W	DEF1	P35732	738 aa	Known RBP	10.15	□□□□□ -0.78
MDL2	YPL270W	YIR014W	P40570	242 aa		10.14	□□□□□ -0.79
MDL2	YPL270W	YPK9	Q12697	1472 aa		10.13	□□□□□ -0.79
MDL2	YPL270W	RNA1	P11745	407 aa	Known RBP	10.13	□□□□□ -0.79
MDL2	YPL270W	HIR3	P47171	1648 aa		10.13	□□□□□ -0.79
MDL2	YPL270W	FPR4	Q06205	392 aa	Predicted RBP	10.13	□□□□□ -0.79

Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms