RNA–Protein interactions for RNA: YGR296W

YRF1-3, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeastyeast

Gene YRF1-3, Length 5,580 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YRF1-3YGR296W DRS1P32892 752 aaKnown RBP11.97□□□□□ -0.49
YRF1-3YGR296W RQC2Q12532 1038 aaKnown RBP11.68□□□□□ -0.54
YRF1-3YGR296W SGS1P35187 1447 aa11.63□□□□□ -0.55
YRF1-3YGR296W MTC1P47018 478 aaKnown RBP11.6□□□□□ -0.55
YRF1-3YGR296W SPA2P23201 1466 aaKnown RBP11.5□□□□□ -0.57
YRF1-3YGR296W SAS10Q12136 610 aaPredicted RBP11.42□□□□□ -0.58
YRF1-3YGR296W INO80P53115 1489 aa11.34□□□□□ -0.59
YRF1-3YGR296W TAF7Q05021 590 aa11.16□□□□□ -0.62
YRF1-3YGR296W IFH1P39520 1085 aa11.11□□□□□ -0.63
YRF1-3YGR296W RTT106P40161 455 aa11.05□□□□□ -0.64
YRF1-3YGR296W TAF2P23255 1407 aa11.03□□□□□ -0.64
YRF1-3YGR296W TFA1P36100 482 aa11.01□□□□□ -0.65
YRF1-3YGR296W TCB3Q03640 1545 aaKnown RBP10.96□□□□□ -0.65
YRF1-3YGR296W SSN2P38931 1420 aa10.92□□□□□ -0.66
YRF1-3YGR296W SKI3P17883 1432 aaKnown RBP10.86□□□□□ -0.67
YRF1-3YGR296W PAF1P38351 445 aa10.85□□□□□ -0.67
YRF1-3YGR296W SCT1P32784 759 aa10.81□□□□□ -0.68
YRF1-3YGR296W NOP7P53261 605 aaKnown RBP10.78□□□□□ -0.68
YRF1-3YGR296W SPT6P23615 1451 aaKnown RBP10.7□□□□□ -0.7
YRF1-3YGR296W POL5P39985 1022 aaKnown RBP10.67□□□□□ -0.7
YRF1-3YGR296W RSE1Q04693 1361 aaKnown RBP10.65□□□□□ -0.7
YRF1-3YGR296W CKB1P43639 278 aa10.65□□□□□ -0.7
YRF1-3YGR296W NAP1P25293 417 aaKnown RBP10.63□□□□□ -0.71
YRF1-3YGR296W XRN1P22147 1528 aaKnown RBP10.6□□□□□ -0.71
YRF1-3YGR296W ORC1P54784 914 aaPredicted RBP10.58□□□□□ -0.72
YRF1-3YGR296W BUD4P47136 1447 aa10.56□□□□□ -0.72
YRF1-3YGR296W LEU3P08638 886 aa10.55□□□□□ -0.72
YRF1-3YGR296W MNN4P36044 1178 aa10.55□□□□□ -0.72
YRF1-3YGR296W YTA7P40340 1379 aa10.52□□□□□ -0.72
YRF1-3YGR296W FPR3P38911 411 aaKnown RBP10.51□□□□□ -0.73
YRF1-3YGR296W BUD21Q08492 214 aaPredicted RBP10.49□□□□□ -0.73
YRF1-3YGR296W STH1P32597 1359 aa10.47□□□□□ -0.73
YRF1-3YGR296W AIM44Q99299 758 aa10.42□□□□□ -0.74
YRF1-3YGR296W SMC4Q12267 1418 aa10.39□□□□□ -0.75
YRF1-3YGR296W ECM5Q03214 1411 aa10.38□□□□□ -0.75
YRF1-3YGR296W URN1Q06525 465 aaKnown RBP10.32□□□□□ -0.76
YRF1-3YGR296W NOP2P40991 618 aaKnown RBP10.32□□□□□ -0.76
YRF1-3YGR296W PAN1P32521 1480 aa10.29□□□□□ -0.76
YRF1-3YGR296W HSL1P34244 1518 aa10.29□□□□□ -0.76
YRF1-3YGR296W KOG1P38873 1557 aa10.28□□□□□ -0.76
YRF1-3YGR296W MRX12P47084 519 aa10.26□□□□□ -0.77
YRF1-3YGR296W SWR1Q05471 1514 aa10.21□□□□□ -0.78
YRF1-3YGR296W ENP1P38333 483 aaKnown RBP10.18□□□□□ -0.78
YRF1-3YGR296W SEC3P33332 1336 aaKnown RBP10.17□□□□□ -0.78
YRF1-3YGR296W DNA2P38859 1522 aa10.17□□□□□ -0.78
YRF1-3YGR296W REV3P14284 1504 aa10.16□□□□□ -0.78
YRF1-3YGR296W MET10P39692 1035 aa10.15□□□□□ -0.78
YRF1-3YGR296W PAP2P53632 584 aaKnown RBP10.15□□□□□ -0.78
YRF1-3YGR296W TRM732Q03496 1420 aa10.15□□□□□ -0.79
YRF1-3YGR296W STU1P38198 1513 aa10.14□□□□□ -0.79
YRF1-3YGR296W IKI3Q06706 1349 aaKnown RBP10.13□□□□□ -0.79
YRF1-3YGR296W HIR3P47171 1648 aa10.12□□□□□ -0.79
YRF1-3YGR296W EAF7P53911 425 aaKnown RBP10.12□□□□□ -0.79
YRF1-3YGR296W BFR2Q06631 534 aaKnown RBP10.12□□□□□ -0.79
YRF1-3YGR296W MYO2P19524 1574 aaKnown RBP10.12□□□□□ -0.79
YRF1-3YGR296W TAF5P38129 798 aa10.1□□□□□ -0.79
YRF1-3YGR296W MON2P48563 1636 aaPredicted RBP10.04□□□□□ -0.8
YRF1-3YGR296W THO2P53552 1597 aaKnown RBP10.04□□□□□ -0.8
YRF1-3YGR296W SIS2P36024 562 aa10.03□□□□□ -0.8
YRF1-3YGR296W UFD4P33202 1483 aa10.02□□□□□ -0.8
YRF1-3YGR296W ABP1P15891 592 aaKnown RBP10.01□□□□□ -0.81
YRF1-3YGR296W ESL2P36168 1195 aa10.01□□□□□ -0.81
YRF1-3YGR296W MMS22Q06164 1454 aa10□□□□□ -0.81
YRF1-3YGR296W NOP8Q08287 484 aaPredicted RBP10□□□□□ -0.81
YRF1-3YGR296W RTF1P53064 558 aa9.98□□□□□ -0.81
YRF1-3YGR296W KIP3P53086 805 aaKnown RBP9.96□□□□□ -0.81
YRF1-3YGR296W CHD1P32657 1468 aa9.96□□□□□ -0.81
YRF1-3YGR296W PDS5Q04264 1277 aa9.94□□□□□ -0.82
YRF1-3YGR296W KAR2P16474 682 aaKnown RBP9.93□□□□□ -0.82
YRF1-3YGR296W ASF1P32447 279 aa9.92□□□□□ -0.82
YRF1-3YGR296W NSR1P27476 414 aaKnown RBP RIP-Chip data9.92□□□□□ -0.82not detected
YRF1-3YGR296W KRI1P42846 591 aaKnown RBP9.9□□□□□ -0.82
YRF1-3YGR296W RAD2P07276 1031 aa9.88□□□□□ -0.83
YRF1-3YGR296W SPT7P35177 1332 aa9.88□□□□□ -0.83
YRF1-3YGR296W MDS3P53094 1487 aa9.87□□□□□ -0.83
YRF1-3YGR296W SPP41P38904 1435 aa9.86□□□□□ -0.83
YRF1-3YGR296W TY1B-DR4Q07793 1604 aa9.86□□□□□ -0.83
YRF1-3YGR296W CHZ1P40019 153 aaPredicted RBP9.85□□□□□ -0.83
YRF1-3YGR296W NUP157P40064 1391 aaKnown RBP9.83□□□□□ -0.84
YRF1-3YGR296W GEA1P47102 1408 aaPredicted RBP9.83□□□□□ -0.84
YRF1-3YGR296W FUN12P39730 1002 aaKnown RBP9.83□□□□□ -0.84
YRF1-3YGR296W TOP2P06786 1428 aaKnown RBP9.82□□□□□ -0.84
YRF1-3YGR296W RKR1Q04781 1562 aa9.82□□□□□ -0.84
YRF1-3YGR296W COG8Q04632 607 aa9.81□□□□□ -0.84
YRF1-3YGR296W TAF8Q03750 510 aa9.8□□□□□ -0.84
YRF1-3YGR296W YRB30P53107 440 aaPredicted RBP9.8□□□□□ -0.84
YRF1-3YGR296W BNR1P40450 1375 aa9.8□□□□□ -0.84
YRF1-3YGR296W POL1P13382 1468 aa9.8□□□□□ -0.84
YRF1-3YGR296W RTR1P40084 226 aaPredicted RBP9.8□□□□□ -0.84
YRF1-3YGR296W CAB3P36076 571 aa9.79□□□□□ -0.84
YRF1-3YGR296W RIA1P53893 1110 aa9.79□□□□□ -0.84
YRF1-3YGR296W SPE2P21182 396 aa9.79□□□□□ -0.84
YRF1-3YGR296W MAK21Q12176 1025 aaKnown RBP9.79□□□□□ -0.84
YRF1-3YGR296W MYO4P32492 1471 aa9.79□□□□□ -0.84
YRF1-3YGR296W YPK9Q12697 1472 aa9.78□□□□□ -0.84
YRF1-3YGR296W PSD2P53037 1138 aaKnown RBP9.77□□□□□ -0.85
YRF1-3YGR296W QCR6P00127 147 aa9.77□□□□□ -0.85
YRF1-3YGR296W YFR016CP43597 1233 aaKnown RBP9.77□□□□□ -0.85
YRF1-3YGR296W BPT1P14772 1559 aa9.77□□□□□ -0.85
YRF1-3YGR296W TSC11P40061 1430 aa9.77□□□□□ -0.85
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms