RNA–Protein interactions for RNA: YER190W

YRF1-2, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeastyeast

Gene YRF1-2, Length 5,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YRF1-2YER190W DRS1P32892 752 aaKnown RBP12.34□□□□□ -0.43
YRF1-2YER190W SGS1P35187 1447 aa12□□□□□ -0.49
YRF1-2YER190W SAS10Q12136 610 aaPredicted RBP11.66□□□□□ -0.54
YRF1-2YER190W SPA2P23201 1466 aaKnown RBP11.56□□□□□ -0.56
YRF1-2YER190W TAF7Q05021 590 aa11.54□□□□□ -0.56
YRF1-2YER190W NOP2P40991 618 aaKnown RBP11.5□□□□□ -0.57
YRF1-2YER190W SSN2P38931 1420 aa11.49□□□□□ -0.57
YRF1-2YER190W INO80P53115 1489 aa11.47□□□□□ -0.57
YRF1-2YER190W RQC2Q12532 1038 aaKnown RBP11.39□□□□□ -0.59
YRF1-2YER190W MNN4P36044 1178 aa11.33□□□□□ -0.6
YRF1-2YER190W POL5P39985 1022 aaKnown RBP11.3□□□□□ -0.6
YRF1-2YER190W TFA1P36100 482 aa11.26□□□□□ -0.61
YRF1-2YER190W IFH1P39520 1085 aa11.26□□□□□ -0.61
YRF1-2YER190W SCT1P32784 759 aa11.14□□□□□ -0.63
YRF1-2YER190W TCB3Q03640 1545 aaKnown RBP11.12□□□□□ -0.63
YRF1-2YER190W SKI3P17883 1432 aaKnown RBP11.11□□□□□ -0.63
YRF1-2YER190W TAF2P23255 1407 aa11.11□□□□□ -0.63
YRF1-2YER190W NOP7P53261 605 aaKnown RBP11.1□□□□□ -0.63
YRF1-2YER190W PAF1P38351 445 aa11.07□□□□□ -0.64
YRF1-2YER190W FPR3P38911 411 aaKnown RBP11.07□□□□□ -0.64
YRF1-2YER190W ENP1P38333 483 aaKnown RBP11.05□□□□□ -0.64
YRF1-2YER190W RTT106P40161 455 aa11.03□□□□□ -0.64
YRF1-2YER190W LEU3P08638 886 aa11.02□□□□□ -0.64
YRF1-2YER190W SEC3P33332 1336 aaKnown RBP10.96□□□□□ -0.65
YRF1-2YER190W MTC1P47018 478 aaKnown RBP10.95□□□□□ -0.66
YRF1-2YER190W EAF7P53911 425 aaKnown RBP10.94□□□□□ -0.66
YRF1-2YER190W YTA7P40340 1379 aa10.93□□□□□ -0.66
YRF1-2YER190W CAB3P36076 571 aa10.93□□□□□ -0.66
YRF1-2YER190W SPT6P23615 1451 aaKnown RBP10.85□□□□□ -0.67
YRF1-2YER190W SMC4Q12267 1418 aa10.85□□□□□ -0.67
YRF1-2YER190W ORC1P54784 914 aaPredicted RBP10.83□□□□□ -0.68
YRF1-2YER190W BUD4P47136 1447 aa10.81□□□□□ -0.68
YRF1-2YER190W BFR2Q06631 534 aaKnown RBP10.8□□□□□ -0.68
YRF1-2YER190W XRN1P22147 1528 aaKnown RBP10.8□□□□□ -0.68
YRF1-2YER190W STH1P32597 1359 aa10.78□□□□□ -0.68
YRF1-2YER190W PAN1P32521 1480 aa10.77□□□□□ -0.68
YRF1-2YER190W RSE1Q04693 1361 aaKnown RBP10.75□□□□□ -0.69
YRF1-2YER190W NAP1P25293 417 aaKnown RBP10.74□□□□□ -0.69
YRF1-2YER190W NSR1P27476 414 aaKnown RBP RIP-Chip data10.74□□□□□ -0.69not detected
YRF1-2YER190W CKB1P43639 278 aa10.73□□□□□ -0.69
YRF1-2YER190W IKI3Q06706 1349 aaKnown RBP10.73□□□□□ -0.69
YRF1-2YER190W AIM44Q99299 758 aa10.71□□□□□ -0.69
YRF1-2YER190W MMS22Q06164 1454 aa10.68□□□□□ -0.7
YRF1-2YER190W BUD21Q08492 214 aaPredicted RBP10.67□□□□□ -0.7
YRF1-2YER190W SPT7P35177 1332 aa10.6□□□□□ -0.71
YRF1-2YER190W SPP41P38904 1435 aa10.6□□□□□ -0.71
YRF1-2YER190W SWR1Q05471 1514 aa10.54□□□□□ -0.72
YRF1-2YER190W YFR016CP43597 1233 aaKnown RBP10.53□□□□□ -0.72
YRF1-2YER190W HSL1P34244 1518 aa10.52□□□□□ -0.73
YRF1-2YER190W QCR6P00127 147 aa10.52□□□□□ -0.73
YRF1-2YER190W STU1P38198 1513 aa10.51□□□□□ -0.73
YRF1-2YER190W RPC31P17890 251 aa10.47□□□□□ -0.73
YRF1-2YER190W LEO1P38439 464 aa10.46□□□□□ -0.74
YRF1-2YER190W COG8Q04632 607 aa10.45□□□□□ -0.74
YRF1-2YER190W MYO2P19524 1574 aaKnown RBP10.45□□□□□ -0.74
YRF1-2YER190W REV3P14284 1504 aa10.45□□□□□ -0.74
YRF1-2YER190W PDS5Q04264 1277 aa10.42□□□□□ -0.74
YRF1-2YER190W YRB30P53107 440 aaPredicted RBP10.41□□□□□ -0.74
YRF1-2YER190W EBP2P36049 427 aaKnown RBP10.39□□□□□ -0.75
YRF1-2YER190W THO2P53552 1597 aaKnown RBP10.39□□□□□ -0.75
YRF1-2YER190W RAD2P07276 1031 aa10.38□□□□□ -0.75
YRF1-2YER190W CHD1P32657 1468 aa10.38□□□□□ -0.75
YRF1-2YER190W CLC1P17891 233 aa10.37□□□□□ -0.75
YRF1-2YER190W CDC45Q08032 650 aa10.36□□□□□ -0.75
YRF1-2YER190W TAF5P38129 798 aa10.35□□□□□ -0.75
YRF1-2YER190W PSD2P53037 1138 aaKnown RBP10.35□□□□□ -0.75
YRF1-2YER190W PAP2P53632 584 aaKnown RBP10.35□□□□□ -0.75
YRF1-2YER190W HIR3P47171 1648 aa10.35□□□□□ -0.75
YRF1-2YER190W MHP1P43638 1398 aa10.34□□□□□ -0.75
YRF1-2YER190W ESC2Q06340 456 aa10.33□□□□□ -0.76
YRF1-2YER190W ECM5Q03214 1411 aa10.32□□□□□ -0.76
YRF1-2YER190W SSM4P40318 1319 aa10.32□□□□□ -0.76
YRF1-2YER190W SIS2P36024 562 aa10.31□□□□□ -0.76
YRF1-2YER190W ESL2P36168 1195 aa10.31□□□□□ -0.76
YRF1-2YER190W TRM732Q03496 1420 aa10.29□□□□□ -0.76
YRF1-2YER190W URN1Q06525 465 aaKnown RBP10.29□□□□□ -0.76
YRF1-2YER190W RNA1P11745 407 aaKnown RBP10.29□□□□□ -0.76
YRF1-2YER190W KIP3P53086 805 aaKnown RBP10.29□□□□□ -0.76
YRF1-2YER190W FUN12P39730 1002 aaKnown RBP10.27□□□□□ -0.77
YRF1-2YER190W VPS27P40343 622 aaKnown RBP10.27□□□□□ -0.77
YRF1-2YER190W GEA1P47102 1408 aaPredicted RBP10.27□□□□□ -0.77
YRF1-2YER190W KRI1P42846 591 aaKnown RBP10.26□□□□□ -0.77
YRF1-2YER190W NOP8Q08287 484 aaPredicted RBP10.24□□□□□ -0.77
YRF1-2YER190W MYO4P32492 1471 aa10.24□□□□□ -0.77
YRF1-2YER190W TSC11P40061 1430 aa10.24□□□□□ -0.77
YRF1-2YER190W MRX12P47084 519 aa10.23□□□□□ -0.77
YRF1-2YER190W MAK21Q12176 1025 aaKnown RBP10.23□□□□□ -0.77
YRF1-2YER190W POL1P13382 1468 aa10.23□□□□□ -0.77
YRF1-2YER190W UFD4P33202 1483 aa10.23□□□□□ -0.77
YRF1-2YER190W KAR2P16474 682 aaKnown RBP10.21□□□□□ -0.77
YRF1-2YER190W BUD27P43573 796 aaKnown RBP RIP-Chip data10.21□□□□□ -0.77not detected
YRF1-2YER190W YDL144CQ07589 356 aa10.21□□□□□ -0.78
YRF1-2YER190W MET10P39692 1035 aa10.19□□□□□ -0.78
YRF1-2YER190W RPP0P05317 312 aaKnown RBP10.18□□□□□ -0.78
YRF1-2YER190W VPS24P36095 224 aaKnown RBP10.18□□□□□ -0.78
YRF1-2YER190W RTR1P40084 226 aaPredicted RBP10.18□□□□□ -0.78
YRF1-2YER190W RTF1P53064 558 aa10.18□□□□□ -0.78
YRF1-2YER190W ECM16Q04217 1267 aaKnown RBP10.16□□□□□ -0.78
YRF1-2YER190W PRS1P32895 427 aaKnown RBP10.16□□□□□ -0.78
YRF1-2YER190W SCC2Q04002 1493 aa10.15□□□□□ -0.78
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms