Protein–RNA interactions for Protein: P36172

VBA5, Vacuolar basic amino acid transporter 5, yeastyeast

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VBA5P36172 HAP5YOR358W 729 nt8.9□□□□□ -0.98
VBA5P36172 HIS2YFR025C 1008 nt8.88□□□□□ -0.99
VBA5P36172 YKR012CYKR012C 378 nt8.88□□□□□ -0.99
VBA5P36172 ACO2YJL200C 2370 nt8.87□□□□□ -0.99
VBA5P36172 MOB1YIL106W 945 nt8.87□□□□□ -0.99
VBA5P36172 YKL053WYKL053W 375 nt8.87□□□□□ -0.99
VBA5P36172 snR31snR31 225 nt8.87□□□□□ -0.99
VBA5P36172 RPD3YNL330C 1302 nt8.86□□□□□ -0.99
VBA5P36172 CRC1YOR100C 984 nt8.86□□□□□ -0.99
VBA5P36172 RPN14YGL004C 1254 nt8.85□□□□□ -0.99
VBA5P36172 SNX3YOR357C 489 nt8.85□□□□□ -0.99
VBA5P36172 YCP4YCR004C 744 nt8.84□□□□□ -0.99
VBA5P36172 SAM50YNL026W 1455 nt8.83□□□□□ -1
VBA5P36172 KDX1YKL161C 1302 nt8.83□□□□□ -1
VBA5P36172 SDS24YBR214W 1584 nt8.83□□□□□ -1
VBA5P36172 REX2YLR059C 810 nt8.83□□□□□ -1
VBA5P36172 LYS20YDL182W 1287 nt8.82□□□□□ -1
VBA5P36172 YNL067W-AYNL067W-A 147 nt8.82□□□□□ -1
VBA5P36172 CYC3YAL039C 810 nt8.81□□□□□ -1
VBA5P36172 REC114YMR133W 1287 nt8.81□□□□□ -1
VBA5P36172 SSL2YIL143C 2532 nt8.81□□□□□ -1
VBA5P36172 SRP54YPR088C 1626 nt8.8□□□□□ -1
VBA5P36172 BNS1YGR230W 414 nt8.8□□□□□ -1
VBA5P36172 VBA3YCL069W 1377 nt8.79□□□□□ -1
VBA5P36172 SWM1YDR260C 513 nt8.79□□□□□ -1
VBA5P36172 SER2YGR208W 930 nt8.79□□□□□ -1
VBA5P36172 RIM2YBR192W 1134 nt8.79□□□□□ -1
VBA5P36172 SAN1YDR143C 1833 nt8.79□□□□□ -1
VBA5P36172 CWP2YKL096W-A 279 nt8.78□□□□□ -1
VBA5P36172 ENO1YGR254W 1314 nt8.78□□□□□ -1
VBA5P36172 KGD2YDR148C 1392 nt8.76□□□□□ -1.01
VBA5P36172 HEL2YDR266C 1920 nt8.76□□□□□ -1.01
VBA5P36172 ATG17YLR423C 1254 nt8.76□□□□□ -1.01
VBA5P36172 YIA6YIL006W 1122 nt8.75□□□□□ -1.01
VBA5P36172 RIB1YBL033C 1038 nt8.75□□□□□ -1.01
VBA5P36172 ODC1YPL134C 933 nt8.75□□□□□ -1.01
VBA5P36172 RMA1YKL132C 1293 nt8.74□□□□□ -1.01
VBA5P36172 SRP102YKL154W 735 nt8.74□□□□□ -1.01
VBA5P36172 YHM2YMR241W 945 nt8.74□□□□□ -1.01
VBA5P36172 YLR280CYLR280C 351 nt8.73□□□□□ -1.01
VBA5P36172 RPC31YNL151C 756 nt8.73□□□□□ -1.01
VBA5P36172 HTS1YPR033C 1641 nt8.72□□□□□ -1.01
VBA5P36172 KRR1YCL059C 951 nt8.72□□□□□ -1.01
VBA5P36172 RIM8YGL045W 1629 nt8.72□□□□□ -1.01
VBA5P36172 ERO1YML130C 1692 nt8.72□□□□□ -1.01
VBA5P36172 SOD2YHR008C 702 nt8.71□□□□□ -1.02
VBA5P36172 PAM17YKR065C 594 nt8.71□□□□□ -1.02
VBA5P36172 YPT11YNL304W 1254 nt8.71□□□□□ -1.02
VBA5P36172 TGA1tA(UGC)A 73 nt8.7□□□□□ -1.02
VBA5P36172 tA(UGC)EtA(UGC)E 73 nt8.7□□□□□ -1.02
VBA5P36172 tA(UGC)GtA(UGC)G 73 nt8.7□□□□□ -1.02
VBA5P36172 tA(UGC)LtA(UGC)L 73 nt8.7□□□□□ -1.02
VBA5P36172 tA(UGC)OtA(UGC)O 73 nt8.7□□□□□ -1.02
VBA5P36172 ERG6YML008C 1152 nt8.7□□□□□ -1.02
VBA5P36172 YGL114WYGL114W 2178 nt8.7□□□□□ -1.02
VBA5P36172 ATG22YCL038C 1587 nt8.69□□□□□ -1.02
VBA5P36172 DPL1YDR294C 1770 nt8.69□□□□□ -1.02
VBA5P36172 YFR020WYFR020W 699 nt8.68□□□□□ -1.02
VBA5P36172 YGR210CYGR210C 1236 nt8.68□□□□□ -1.02
VBA5P36172 SBP1YHL034C 885 nt8.68□□□□□ -1.02
VBA5P36172 PTC6YCR079W 1329 nt8.67□□□□□ -1.02
VBA5P36172 YMR007WYMR007W 381 nt8.67□□□□□ -1.02
VBA5P36172 GAS1YMR307W 1680 nt8.67□□□□□ -1.02
VBA5P36172 IDP3YNL009W 1263 nt8.67□□□□□ -1.02
VBA5P36172 GID7YCL039W 2238 nt8.66□□□□□ -1.02
VBA5P36172 HEM14YER014W 1620 nt8.65□□□□□ -1.02
VBA5P36172 MDM35YKL053C-A 261 nt8.65□□□□□ -1.02
VBA5P36172 CBK1YNL161W 2271 nt8.65□□□□□ -1.03
VBA5P36172 MLS1YNL117W 1665 nt8.63□□□□□ -1.03
VBA5P36172 FCY1YPR062W 477 nt8.63□□□□□ -1.03
VBA5P36172 YMR209CYMR209C 1374 nt8.62□□□□□ -1.03
VBA5P36172 RSM7YJR113C 744 nt8.61□□□□□ -1.03
VBA5P36172 YNL165WYNL165W 1221 nt8.61□□□□□ -1.03
VBA5P36172 RCR1YBR005W 642 nt8.61□□□□□ -1.03
VBA5P36172 YPL108WYPL108W 507 nt8.61□□□□□ -1.03
VBA5P36172 SFP1YLR403W 2052 nt8.61□□□□□ -1.03
VBA5P36172 NPP1YCR026C 2229 nt8.61□□□□□ -1.03
VBA5P36172 THI3YDL080C 1830 nt8.59□□□□□ -1.03
VBA5P36172 MET2YNL277W 1461 nt8.59□□□□□ -1.03
VBA5P36172 YMR316C-BYMR316C-B 309 nt8.59□□□□□ -1.03
VBA5P36172 GGA2YHR108W 1758 nt8.58□□□□□ -1.04
VBA5P36172 LEU4YNL104C 1860 nt8.57□□□□□ -1.04
VBA5P36172 DMA2YNL116W 1569 nt8.57□□□□□ -1.04
VBA5P36172 GPM1YKL152C 744 nt8.57□□□□□ -1.04
VBA5P36172 GNP1YDR508C 1992 nt8.57□□□□□ -1.04
VBA5P36172 POP2YNR052C 1302 nt8.56□□□□□ -1.04
VBA5P36172 YDR467CYDR467C 327 nt8.56□□□□□ -1.04
VBA5P36172 YER152W-AYER152W-A 567 nt8.56□□□□□ -1.04
VBA5P36172 YJL160CYJL160C 864 nt8.54□□□□□ -1.04
VBA5P36172 YJL211CYJL211C 444 nt8.54□□□□□ -1.04
VBA5P36172 HMT1YBR034C 1047 nt8.54□□□□□ -1.04
VBA5P36172 ESBP6YNL125C 2022 nt8.53□□□□□ -1.04
VBA5P36172 YMR166CYMR166C 1107 nt8.53□□□□□ -1.04
VBA5P36172 LSP1YPL004C 1026 nt8.53□□□□□ -1.04
VBA5P36172 HXT10YFL011W 1641 nt8.51□□□□□ -1.05
VBA5P36172 tE(CUC)DtE(CUC)D 72 nt8.51□□□□□ -1.05
VBA5P36172 tE(CUC)ItE(CUC)I 72 nt8.51□□□□□ -1.05
VBA5P36172 YLR460CYLR460C 1131 nt8.51□□□□□ -1.05
VBA5P36172 MAE1YKL029C 2010 nt8.51□□□□□ -1.05
VBA5P36172 EEB1YPL095C 1371 nt8.5□□□□□ -1.05
Retrieved 100 of 7,029 protein–RNA pairs in 16.8 ms