RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C DRS1P32892 752 aaKnown RBP18.92■□□□□ 0.62
ATG17YLR423C MTC1P47018 478 aaKnown RBP18.15■□□□□ 0.5
ATG17YLR423C BFR2Q06631 534 aaKnown RBP16.66■□□□□ 0.26
ATG17YLR423C TFA1P36100 482 aa15.99■□□□□ 0.15
ATG17YLR423C DIP2Q12220 943 aaPredicted RBP15.88■□□□□ 0.13
ATG17YLR423C AVT3P36062 692 aa15.75■□□□□ 0.11
ATG17YLR423C RSE1Q04693 1361 aaKnown RBP14.84□□□□□ -0.03
ATG17YLR423C ISW2Q08773 1120 aa14.71□□□□□ -0.05
ATG17YLR423C RPG1P38249 964 aaKnown RBP14.46□□□□□ -0.09
ATG17YLR423C RQC2Q12532 1038 aaKnown RBP14.38□□□□□ -0.11
ATG17YLR423C FAP1P53971 965 aa14.34□□□□□ -0.11
ATG17YLR423C RPL17AP05740 184 aaKnown RBP14.25□□□□□ -0.13
ATG17YLR423C RPL17BP46990 184 aaKnown RBP14.25□□□□□ -0.13
ATG17YLR423C PRI1P10363 409 aa14.21□□□□□ -0.13
ATG17YLR423C REB1P21538 810 aa14.07□□□□□ -0.16
ATG17YLR423C AAD16Q02895 342 aa13.93□□□□□ -0.18
ATG17YLR423C PTP3P40048 928 aa13.66□□□□□ -0.22
ATG17YLR423C SPT21P35209 758 aa13.65□□□□□ -0.22
ATG17YLR423C RIM101P33400 625 aa13.62□□□□□ -0.23
ATG17YLR423C TSR3Q12094 313 aaKnown RBP13.59□□□□□ -0.23
ATG17YLR423C DMA1P38823 416 aa13.46□□□□□ -0.25
ATG17YLR423C SSP1P38871 571 aa13.35□□□□□ -0.27
ATG17YLR423C PRY3P47033 881 aa13.35□□□□□ -0.27
ATG17YLR423C YAH1Q12184 172 aaKnown RBP13.23□□□□□ -0.29
ATG17YLR423C OXP1P28273 1286 aa13.2□□□□□ -0.3
ATG17YLR423C YIL055CP40523 627 aaKnown RBP13.18□□□□□ -0.3
ATG17YLR423C ARP8Q12386 881 aaKnown RBP RIP-Chip data13.15□□□□□ -0.3not detected
ATG17YLR423C MRPL32P25348 183 aa13.1□□□□□ -0.31
ATG17YLR423C YKR023WP36119 530 aaKnown RBP13.08□□□□□ -0.32
ATG17YLR423C YLR271WQ06152 274 aa12.97□□□□□ -0.33
ATG17YLR423C HOP09932 586 aa12.89□□□□□ -0.35
ATG17YLR423C RSM7P47150 247 aa12.88□□□□□ -0.35
ATG17YLR423C TFC8Q12308 588 aa12.85□□□□□ -0.35
ATG17YLR423C MGA2P40578 1113 aa12.81□□□□□ -0.36
ATG17YLR423C DCD1P06773 312 aa12.78□□□□□ -0.36
ATG17YLR423C CDC27P38042 758 aa12.68□□□□□ -0.38
ATG17YLR423C AI2P03876 854 aa12.62□□□□□ -0.39
ATG17YLR423C CST9Q06032 482 aa12.62□□□□□ -0.39
ATG17YLR423C HAA1Q12753 694 aaKnown RBP12.59□□□□□ -0.39
ATG17YLR423C BBC1P47068 1157 aa12.56□□□□□ -0.4
ATG17YLR423C PSD2P53037 1138 aaKnown RBP12.54□□□□□ -0.4
ATG17YLR423C BCH2P36122 765 aa12.51□□□□□ -0.41
ATG17YLR423C LEO1P38439 464 aa12.5□□□□□ -0.41
ATG17YLR423C TAF7Q05021 590 aa12.5□□□□□ -0.41
ATG17YLR423C YCK3P39962 524 aa12.44□□□□□ -0.42
ATG17YLR423C SAS10Q12136 610 aaPredicted RBP12.44□□□□□ -0.42
ATG17YLR423C EPS1P40557 701 aa12.36□□□□□ -0.43
ATG17YLR423C LEU3P08638 886 aa12.3□□□□□ -0.44
ATG17YLR423C MRM1P25270 412 aa12.28□□□□□ -0.44
ATG17YLR423C BDF1P35817 686 aa12.24□□□□□ -0.45
ATG17YLR423C SCY1P53009 804 aa12.24□□□□□ -0.45
ATG17YLR423C RAM2P29703 316 aa12.22□□□□□ -0.45
ATG17YLR423C SET1P38827 1080 aaKnown RBP12.16□□□□□ -0.46
ATG17YLR423C RTG3P38165 486 aa12.15□□□□□ -0.46
ATG17YLR423C RCR1P38212 213 aa12.11□□□□□ -0.47
ATG17YLR423C MAP2P38174 421 aaKnown RBP12.1□□□□□ -0.47
ATG17YLR423C UBP10P53874 792 aaPredicted RBP12.1□□□□□ -0.47
ATG17YLR423C SPB4P25808 606 aaPredicted RBP12.04□□□□□ -0.48
ATG17YLR423C IFH1P39520 1085 aa12.04□□□□□ -0.48
ATG17YLR423C VPS70P47161 811 aa12.04□□□□□ -0.48
ATG17YLR423C CKB1P43639 278 aa12.02□□□□□ -0.49
ATG17YLR423C MAK11P20484 414 aaKnown RBP12.01□□□□□ -0.49
ATG17YLR423C YGL015CP33199 130 aa12□□□□□ -0.49
ATG17YLR423C SLX5P32828 619 aaKnown RBP11.98□□□□□ -0.49
ATG17YLR423C RPN1P38764 993 aaKnown RBP11.97□□□□□ -0.49
ATG17YLR423C YPR148CQ06523 435 aa11.97□□□□□ -0.49
ATG17YLR423C VPS29P38759 282 aa11.88□□□□□ -0.51
ATG17YLR423C COQ8P27697 501 aa11.85□□□□□ -0.51
ATG17YLR423C YMR1P47147 688 aaKnown RBP RIP-Chip data11.83□□□□□ -0.52not detected
ATG17YLR423C MIF2P35201 549 aa11.8□□□□□ -0.52
ATG17YLR423C PBS2P08018 668 aa11.76□□□□□ -0.53
ATG17YLR423C DBP1P24784 617 aaKnown RBP11.73□□□□□ -0.53
ATG17YLR423C YFR006WP43590 535 aa11.73□□□□□ -0.53
ATG17YLR423C NOP53Q12080 455 aaKnown RBP11.73□□□□□ -0.53
ATG17YLR423C STS1P38637 319 aa11.72□□□□□ -0.53
ATG17YLR423C DSF2P38213 736 aa11.71□□□□□ -0.53
ATG17YLR423C DMA2P53924 522 aa11.7□□□□□ -0.54
ATG17YLR423C YOR238WQ08634 303 aa11.69□□□□□ -0.54
ATG17YLR423C TIF4632P39936 914 aaKnown RBP11.68□□□□□ -0.54
ATG17YLR423C EDS1P38073 919 aa11.65□□□□□ -0.54
ATG17YLR423C REF2P42073 533 aaPredicted RBP11.64□□□□□ -0.55
ATG17YLR423C MAM3Q12296 706 aa11.63□□□□□ -0.55
ATG17YLR423C YNR021WP53723 404 aaKnown RBP11.58□□□□□ -0.56
ATG17YLR423C PIB1Q06651 286 aa11.57□□□□□ -0.56
ATG17YLR423C PTC3P34221 468 aaKnown RBP11.56□□□□□ -0.56
ATG17YLR423C YAP5P40574 245 aa11.56□□□□□ -0.56
ATG17YLR423C IES2P40154 320 aa11.54□□□□□ -0.56
ATG17YLR423C KIN1P13185 1064 aa11.51□□□□□ -0.57
ATG17YLR423C NSR1P27476 414 aaKnown RBP RIP-Chip data11.51□□□□□ -0.57not detected
ATG17YLR423C TGL3P40308 642 aa11.51□□□□□ -0.57
ATG17YLR423C GLC3P32775 704 aa11.49□□□□□ -0.57
ATG17YLR423C MAK21Q12176 1025 aaKnown RBP11.49□□□□□ -0.57
ATG17YLR423C COX6P00427 148 aa11.44□□□□□ -0.58
ATG17YLR423C VMA1P17255 1071 aaKnown RBP11.44□□□□□ -0.58
ATG17YLR423C ATH1P48016 1211 aa11.44□□□□□ -0.58
ATG17YLR423C DIT2P21595 489 aa11.43□□□□□ -0.58
ATG17YLR423C AIM7Q12156 149 aa11.43□□□□□ -0.58
ATG17YLR423C HGH1P48362 394 aaKnown RBP11.41□□□□□ -0.58
ATG17YLR423C NUP42P49686 430 aaKnown RBP11.41□□□□□ -0.58
ATG17YLR423C GRE2Q12068 342 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms