RNA–Protein interactions for RNA: YNL026W

SAM50, Transcript of Component of the Sorting and Assembly Machinery (SAM) complex, yeastyeast

Gene SAM50, Length 1,455 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SAM50YNL026W INO80P53115 1489 aa17.84■□□□□ 0.45
SAM50YNL026W MON2P48563 1636 aaPredicted RBP17.81■□□□□ 0.44
SAM50YNL026W DNA2P38859 1522 aa17■□□□□ 0.31
SAM50YNL026W SWR1Q05471 1514 aa16.93■□□□□ 0.3
SAM50YNL026W TCB3Q03640 1545 aaKnown RBP16.8■□□□□ 0.28
SAM50YNL026W TY1B-DR4Q07793 1604 aa16.7■□□□□ 0.26
SAM50YNL026W KOG1P38873 1557 aa16.69■□□□□ 0.26
SAM50YNL026W SGS1P35187 1447 aa16.52■□□□□ 0.24
SAM50YNL026W RSE1Q04693 1361 aaKnown RBP16.43■□□□□ 0.22
SAM50YNL026W SPT6P23615 1451 aaKnown RBP16.13■□□□□ 0.17
SAM50YNL026W HSL1P34244 1518 aa16.13■□□□□ 0.17
SAM50YNL026W SPA2P23201 1466 aaKnown RBP15.96■□□□□ 0.15
SAM50YNL026W ECM5Q03214 1411 aa15.89■□□□□ 0.13
SAM50YNL026W HIR3P47171 1648 aa15.78■□□□□ 0.12
SAM50YNL026W BUD4P47136 1447 aa15.72■□□□□ 0.11
SAM50YNL026W THO2P53552 1597 aaKnown RBP15.65■□□□□ 0.1
SAM50YNL026W MTC1P47018 478 aaKnown RBP15.57■□□□□ 0.08
SAM50YNL026W MDS3P53094 1487 aa15.54■□□□□ 0.08
SAM50YNL026W XRN1P22147 1528 aaKnown RBP15.49■□□□□ 0.07
SAM50YNL026W PEP1P32319 1579 aa15.38■□□□□ 0.05
SAM50YNL026W REV3P14284 1504 aa15.28■□□□□ 0.04
SAM50YNL026W ATG2P53855 1592 aa15.23■□□□□ 0.03
SAM50YNL026W SSN2P38931 1420 aa15.14■□□□□ 0.01
SAM50YNL026W BPT1P14772 1559 aa15.13■□□□□ 0.01
SAM50YNL026W SKI3P17883 1432 aaKnown RBP15.04■□□□□ -0
SAM50YNL026W TAF2P23255 1407 aa15.04■□□□□ -0
SAM50YNL026W SIN3P22579 1536 aa14.97□□□□□ -0.01
SAM50YNL026W SSK2P53599 1579 aa14.88□□□□□ -0.03
SAM50YNL026W YCF1P39109 1515 aaKnown RBP14.87□□□□□ -0.03
SAM50YNL026W UFD4P33202 1483 aa14.77□□□□□ -0.04
SAM50YNL026W ESP1Q03018 1630 aa14.72□□□□□ -0.05
SAM50YNL026W DRS1P32892 752 aaKnown RBP14.65□□□□□ -0.06
SAM50YNL026W SCC2Q04002 1493 aa14.65□□□□□ -0.07
SAM50YNL026W YPK9Q12697 1472 aa14.64□□□□□ -0.07
SAM50YNL026W RPO31P04051 1460 aa14.57□□□□□ -0.08
SAM50YNL026W CHD1P32657 1468 aa14.56□□□□□ -0.08
SAM50YNL026W MET5P47169 1442 aa14.52□□□□□ -0.09
SAM50YNL026W MYO2P19524 1574 aaKnown RBP14.5□□□□□ -0.09
SAM50YNL026W CDC25P04821 1589 aa14.49□□□□□ -0.09
SAM50YNL026W DNF1P32660 1571 aa14.49□□□□□ -0.09
SAM50YNL026W RQC2Q12532 1038 aaKnown RBP14.44□□□□□ -0.1
SAM50YNL026W PAN1P32521 1480 aa14.39□□□□□ -0.11
SAM50YNL026W MIF2P35201 549 aa14.38□□□□□ -0.11
SAM50YNL026W LTE1P07866 1435 aa14.38□□□□□ -0.11
SAM50YNL026W TY2B-LR1P0C2J3 1770 aa14.34□□□□□ -0.11
SAM50YNL026W TY2B-FP0CX63 1770 aa14.34□□□□□ -0.11
SAM50YNL026W TY2B-GR2P0CX64 1770 aa14.34□□□□□ -0.11
SAM50YNL026W TY2B-CP25384 1770 aa14.34□□□□□ -0.11
SAM50YNL026W TY2B-DR2Q03494 1770 aa14.34□□□□□ -0.11
SAM50YNL026W TY1B-DR1Q03855 1755 aa14.34□□□□□ -0.11
SAM50YNL026W TY2B-DR3Q07791 1770 aaKnown RBP14.34□□□□□ -0.11
SAM50YNL026W TY2B-OR1Q12113 1770 aa14.34□□□□□ -0.11
SAM50YNL026W TY2B-DR1Q12472 1770 aa14.34□□□□□ -0.11
SAM50YNL026W TY2B-OR2Q12501 1770 aa14.34□□□□□ -0.11
SAM50YNL026W ESC1Q03661 1658 aaKnown RBP14.32□□□□□ -0.12
SAM50YNL026W TOP2P06786 1428 aaKnown RBP14.32□□□□□ -0.12
SAM50YNL026W TY1B-BRQ12193 1756 aa14.31□□□□□ -0.12
SAM50YNL026W TY1B-GR3Q12316 1755 aa14.31□□□□□ -0.12
SAM50YNL026W TY1B-ORQ92393 1755 aa14.31□□□□□ -0.12
SAM50YNL026W RKR1Q04781 1562 aa14.3□□□□□ -0.12
SAM50YNL026W RPA190P10964 1664 aaKnown RBP14.23□□□□□ -0.13
SAM50YNL026W MMS22Q06164 1454 aa14.22□□□□□ -0.13
SAM50YNL026W ITT1Q04638 464 aa14.2□□□□□ -0.14
SAM50YNL026W BNI1P41832 1953 aa14.2□□□□□ -0.14
SAM50YNL026W GEA2P39993 1459 aaKnown RBP14.17□□□□□ -0.14
SAM50YNL026W TY2B-BQ12491 1770 aa14.16□□□□□ -0.14
SAM50YNL026W TRM732Q03496 1420 aa14.15□□□□□ -0.14
SAM50YNL026W TY1B-HO13535 1793 aa14.14□□□□□ -0.15
SAM50YNL026W TY1B-DR5P0C2I2 1755 aa14.14□□□□□ -0.15
SAM50YNL026W TY1B-DR6P0C2I3 1755 aa14.14□□□□□ -0.15
SAM50YNL026W TY1B-LR2P0C2I5 1755 aa14.14□□□□□ -0.15
SAM50YNL026W TY1B-LR3P0C2I6 1755 aaKnown RBP14.14□□□□□ -0.15
SAM50YNL026W TY1B-PR1P0C2I9 1755 aaKnown RBP14.14□□□□□ -0.15
SAM50YNL026W TY1B-PR2P0C2J0 1756 aa14.14□□□□□ -0.15
SAM50YNL026W TY1B-PR3P0C2J1 1755 aaKnown RBP14.14□□□□□ -0.15
SAM50YNL026W TY1B-JR1P47098 1755 aa14.14□□□□□ -0.15
SAM50YNL026W TY1B-ML2Q03434 1755 aaKnown RBP14.14□□□□□ -0.15
SAM50YNL026W TY1B-ER1Q03612 1755 aa14.14□□□□□ -0.15
SAM50YNL026W TY1B-ML1Q04711 1755 aaKnown RBP14.14□□□□□ -0.15
SAM50YNL026W TY1B-GR2Q12269 1755 aa14.14□□□□□ -0.15
SAM50YNL026W TY1B-OLQ12273 1755 aa14.14□□□□□ -0.15
SAM50YNL026W TY1B-PLQ12414 1755 aaKnown RBP14.14□□□□□ -0.15
SAM50YNL026W POL1P13382 1468 aa14.12□□□□□ -0.15
SAM50YNL026W TY1B-DR3Q99231 1755 aa14.1□□□□□ -0.15
SAM50YNL026W SMC4Q12267 1418 aa14.06□□□□□ -0.16
SAM50YNL026W ABP1P15891 592 aaKnown RBP14.05□□□□□ -0.16
SAM50YNL026W SPP41P38904 1435 aa14.04□□□□□ -0.16
SAM50YNL026W NUP159P40477 1460 aa14.02□□□□□ -0.16
SAM50YNL026W YOR1P53049 1477 aa14.02□□□□□ -0.16
SAM50YNL026W MMS1Q06211 1407 aa14.01□□□□□ -0.17
SAM50YNL026W STU1P38198 1513 aa13.99□□□□□ -0.17
SAM50YNL026W VPS15P22219 1454 aa13.97□□□□□ -0.17
SAM50YNL026W DRS2P39524 1355 aa13.97□□□□□ -0.17
SAM50YNL026W TSC11P40061 1430 aa13.95□□□□□ -0.18
SAM50YNL026W YRF1-1P0CX20 1796 aa13.95□□□□□ -0.18
SAM50YNL026W YRF1-5P0CX21 1796 aa13.95□□□□□ -0.18
SAM50YNL026W YRF1-8P0CX22 1796 aa13.95□□□□□ -0.18
SAM50YNL026W YFR006WP43590 535 aa13.9□□□□□ -0.18
SAM50YNL026W VTH1P40438 1549 aa13.88□□□□□ -0.19
SAM50YNL026W VTH2P40890 1549 aa13.88□□□□□ -0.19
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms