Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.49■□□□□ 0.87
PF4V1P10720 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.47■□□□□ 0.87
PF4V1P10720 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PF4V1P10720 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PF4V1P10720 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PF4V1P10720 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.46■□□□□ 0.87
PF4V1P10720 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PF4V1P10720 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.45■□□□□ 0.86
PF4V1P10720 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PF4V1P10720 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PF4V1P10720 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.44■□□□□ 0.86
PF4V1P10720 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PF4V1P10720 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PF4V1P10720 LINC01971-201ENST00000617888 1048 ntBASIC20.43■□□□□ 0.86
PF4V1P10720 ST7-AS1-201ENST00000456775 1889 ntBASIC20.42■□□□□ 0.86
PF4V1P10720 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.42■□□□□ 0.86
PF4V1P10720 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PF4V1P10720 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.41■□□□□ 0.86
PF4V1P10720 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
PF4V1P10720 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PF4V1P10720 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.41■□□□□ 0.86
PF4V1P10720 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PF4V1P10720 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PF4V1P10720 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PF4V1P10720 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.4■□□□□ 0.86
PF4V1P10720 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.4■□□□□ 0.86
PF4V1P10720 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PF4V1P10720 MIR639-201ENST00000384974 98 ntBASIC20.39■□□□□ 0.85
PF4V1P10720 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.39■□□□□ 0.85
PF4V1P10720 DUX4L11-201ENST00000611504 1267 ntBASIC20.39■□□□□ 0.85
PF4V1P10720 DUX4L12-201ENST00000614593 1267 ntBASIC20.39■□□□□ 0.85
PF4V1P10720 DUX4L14-201ENST00000621227 1267 ntBASIC20.39■□□□□ 0.85
PF4V1P10720 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.39■□□□□ 0.85
PF4V1P10720 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
PF4V1P10720 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.38■□□□□ 0.85
PF4V1P10720 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PF4V1P10720 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PF4V1P10720 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PF4V1P10720 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.37■□□□□ 0.85
PF4V1P10720 MIR3648-2-201ENST00000581792 180 ntBASIC20.37■□□□□ 0.85
PF4V1P10720 AC016575.1-201ENST00000607026 382 ntBASIC20.37■□□□□ 0.85
PF4V1P10720 MIR3648-1-201ENST00000615959 180 ntBASIC20.37■□□□□ 0.85
PF4V1P10720 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PF4V1P10720 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PF4V1P10720 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PF4V1P10720 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PF4V1P10720 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PF4V1P10720 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PF4V1P10720 ABCB10P1-201ENST00000614297 2181 ntBASIC20.35■□□□□ 0.85
PF4V1P10720 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PF4V1P10720 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
PF4V1P10720 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.35■□□□□ 0.85
PF4V1P10720 MIR4449-201ENST00000578365 66 ntBASIC20.35■□□□□ 0.85
PF4V1P10720 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PF4V1P10720 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PF4V1P10720 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PF4V1P10720 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.34■□□□□ 0.85
PF4V1P10720 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
PF4V1P10720 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.33■□□□□ 0.85
PF4V1P10720 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PF4V1P10720 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.33■□□□□ 0.85
PF4V1P10720 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
PF4V1P10720 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PF4V1P10720 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC20.32■□□□□ 0.84
PF4V1P10720 AC127502.1-201ENST00000399971 1502 ntBASIC20.32■□□□□ 0.84
PF4V1P10720 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PF4V1P10720 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PF4V1P10720 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PF4V1P10720 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PF4V1P10720 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PF4V1P10720 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.3■□□□□ 0.84
PF4V1P10720 CR559946.2-201ENST00000623684 991 ntBASIC20.3■□□□□ 0.84
PF4V1P10720 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PF4V1P10720 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PF4V1P10720 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PF4V1P10720 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20.29■□□□□ 0.84
PF4V1P10720 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PF4V1P10720 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PF4V1P10720 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
PF4V1P10720 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PF4V1P10720 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PF4V1P10720 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC20.26■□□□□ 0.83
PF4V1P10720 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PF4V1P10720 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PF4V1P10720 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.26■□□□□ 0.83
PF4V1P10720 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PF4V1P10720 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PF4V1P10720 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PF4V1P10720 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PF4V1P10720 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PF4V1P10720 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PF4V1P10720 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PF4V1P10720 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PF4V1P10720 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
PF4V1P10720 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PF4V1P10720 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PF4V1P10720 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PF4V1P10720 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.23■□□□□ 0.83
PF4V1P10720 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PF4V1P10720 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms