Protein–RNA interactions for Protein: O95167

NDUFA3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3O95167 AL139393.2-201ENST00000608721 2025 ntBASIC20.74■□□□□ 0.91
NDUFA3O95167 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
NDUFA3O95167 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
NDUFA3O95167 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
NDUFA3O95167 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NDUFA3O95167 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.72■□□□□ 0.91
NDUFA3O95167 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NDUFA3O95167 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NDUFA3O95167 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.71■□□□□ 0.91
NDUFA3O95167 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NDUFA3O95167 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NDUFA3O95167 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NDUFA3O95167 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NDUFA3O95167 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NDUFA3O95167 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NDUFA3O95167 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.69■□□□□ 0.9
NDUFA3O95167 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
NDUFA3O95167 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NDUFA3O95167 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC20.69■□□□□ 0.9
NDUFA3O95167 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
NDUFA3O95167 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.69■□□□□ 0.9
NDUFA3O95167 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NDUFA3O95167 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NDUFA3O95167 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.68■□□□□ 0.9
NDUFA3O95167 AP004833.2-201ENST00000532228 1454 ntBASIC20.68■□□□□ 0.9
NDUFA3O95167 AC139426.1-201ENST00000568218 2529 ntBASIC20.67■□□□□ 0.9
NDUFA3O95167 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.67■□□□□ 0.9
NDUFA3O95167 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
NDUFA3O95167 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.67■□□□□ 0.9
NDUFA3O95167 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NDUFA3O95167 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.67■□□□□ 0.9
NDUFA3O95167 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
NDUFA3O95167 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NDUFA3O95167 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDUFA3O95167 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDUFA3O95167 RPS2P35-201ENST00000443417 897 ntBASIC20.65■□□□□ 0.9
NDUFA3O95167 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDUFA3O95167 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.9
NDUFA3O95167 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.64■□□□□ 0.9
NDUFA3O95167 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NDUFA3O95167 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NDUFA3O95167 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
NDUFA3O95167 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
NDUFA3O95167 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NDUFA3O95167 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NDUFA3O95167 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NDUFA3O95167 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.63■□□□□ 0.89
NDUFA3O95167 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.63■□□□□ 0.89
NDUFA3O95167 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDUFA3O95167 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDUFA3O95167 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.62■□□□□ 0.89
NDUFA3O95167 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NDUFA3O95167 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.6■□□□□ 0.89
NDUFA3O95167 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NDUFA3O95167 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.6■□□□□ 0.89
NDUFA3O95167 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
NDUFA3O95167 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NDUFA3O95167 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.6■□□□□ 0.89
NDUFA3O95167 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.6■□□□□ 0.89
NDUFA3O95167 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NDUFA3O95167 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.6■□□□□ 0.89
NDUFA3O95167 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NDUFA3O95167 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.59■□□□□ 0.89
NDUFA3O95167 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NDUFA3O95167 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NDUFA3O95167 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NDUFA3O95167 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NDUFA3O95167 LINC00273-201ENST00000539813 1452 ntBASIC20.57■□□□□ 0.88
NDUFA3O95167 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NDUFA3O95167 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NDUFA3O95167 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NDUFA3O95167 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NDUFA3O95167 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NDUFA3O95167 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NDUFA3O95167 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NDUFA3O95167 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NDUFA3O95167 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
NDUFA3O95167 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.54■□□□□ 0.88
NDUFA3O95167 AC135983.2-203ENST00000454486 1613 ntBASIC20.54■□□□□ 0.88
NDUFA3O95167 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.54■□□□□ 0.88
NDUFA3O95167 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NDUFA3O95167 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
NDUFA3O95167 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NDUFA3O95167 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NDUFA3O95167 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.53■□□□□ 0.88
NDUFA3O95167 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.52■□□□□ 0.88
NDUFA3O95167 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NDUFA3O95167 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NDUFA3O95167 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
NDUFA3O95167 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
NDUFA3O95167 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
NDUFA3O95167 DUX4L29-201ENST00000425409 679 ntBASIC20.51■□□□□ 0.87
NDUFA3O95167 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.51■□□□□ 0.87
NDUFA3O95167 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NDUFA3O95167 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NDUFA3O95167 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NDUFA3O95167 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
NDUFA3O95167 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NDUFA3O95167 AC021231.2-201ENST00000594613 730 ntBASIC20.5■□□□□ 0.87
NDUFA3O95167 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms