Protein–RNA interactions for Protein: O75954

TSPAN9, Tetraspanin-9, humanhuman

Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9O75954 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.83■■□□□ 1.09
TSPAN9O75954 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TSPAN9O75954 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TSPAN9O75954 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.83■■□□□ 1.09
TSPAN9O75954 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TSPAN9O75954 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TSPAN9O75954 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TSPAN9O75954 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
TSPAN9O75954 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.82■■□□□ 1.08
TSPAN9O75954 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TSPAN9O75954 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TSPAN9O75954 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TSPAN9O75954 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.82■■□□□ 1.08
TSPAN9O75954 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TSPAN9O75954 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.81■■□□□ 1.08
TSPAN9O75954 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
TSPAN9O75954 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.81■■□□□ 1.08
TSPAN9O75954 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TSPAN9O75954 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TSPAN9O75954 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TSPAN9O75954 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.81■■□□□ 1.08
TSPAN9O75954 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TSPAN9O75954 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.8■■□□□ 1.08
TSPAN9O75954 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TSPAN9O75954 MIR3665-201ENST00000578708 105 ntBASIC21.8■■□□□ 1.08
TSPAN9O75954 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TSPAN9O75954 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
TSPAN9O75954 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.79■■□□□ 1.08
TSPAN9O75954 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.79■■□□□ 1.08
TSPAN9O75954 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TSPAN9O75954 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.78■■□□□ 1.08
TSPAN9O75954 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TSPAN9O75954 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.77■■□□□ 1.08
TSPAN9O75954 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
TSPAN9O75954 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TSPAN9O75954 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.76■■□□□ 1.07
TSPAN9O75954 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.75■■□□□ 1.07
TSPAN9O75954 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.75■■□□□ 1.07
TSPAN9O75954 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.74■■□□□ 1.07
TSPAN9O75954 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TSPAN9O75954 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TSPAN9O75954 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC21.73■■□□□ 1.07
TSPAN9O75954 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TSPAN9O75954 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TSPAN9O75954 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TSPAN9O75954 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TSPAN9O75954 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
TSPAN9O75954 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TSPAN9O75954 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TSPAN9O75954 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TSPAN9O75954 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TSPAN9O75954 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TSPAN9O75954 MIR762-201ENST00000390236 83 ntBASIC21.7■■□□□ 1.06
TSPAN9O75954 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TSPAN9O75954 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.69■■□□□ 1.06
TSPAN9O75954 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC21.69■■□□□ 1.06
TSPAN9O75954 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TSPAN9O75954 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TSPAN9O75954 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TSPAN9O75954 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TSPAN9O75954 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC21.68■■□□□ 1.06
TSPAN9O75954 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
TSPAN9O75954 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TSPAN9O75954 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TSPAN9O75954 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TSPAN9O75954 DUX4L28-201ENST00000623687 678 ntBASIC21.67■■□□□ 1.06
TSPAN9O75954 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TSPAN9O75954 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TSPAN9O75954 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TSPAN9O75954 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.66■■□□□ 1.06
TSPAN9O75954 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TSPAN9O75954 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
TSPAN9O75954 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TSPAN9O75954 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TSPAN9O75954 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TSPAN9O75954 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
TSPAN9O75954 AC087741.3-201ENST00000624270 1347 ntBASIC21.65■■□□□ 1.06
TSPAN9O75954 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
TSPAN9O75954 AC005559.1-201ENST00000589661 871 ntBASIC21.65■■□□□ 1.06
TSPAN9O75954 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.65■■□□□ 1.06
TSPAN9O75954 WASH5P-204ENST00000632292 975 ntBASIC21.65■■□□□ 1.06
TSPAN9O75954 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
TSPAN9O75954 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
TSPAN9O75954 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
TSPAN9O75954 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
TSPAN9O75954 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TSPAN9O75954 AC120057.4-201ENST00000624722 1615 ntBASIC21.64■■□□□ 1.05
TSPAN9O75954 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
TSPAN9O75954 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.63■■□□□ 1.05
TSPAN9O75954 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TSPAN9O75954 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TSPAN9O75954 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.62■■□□□ 1.05
TSPAN9O75954 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC21.62■■□□□ 1.05
TSPAN9O75954 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TSPAN9O75954 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TSPAN9O75954 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
TSPAN9O75954 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
TSPAN9O75954 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.6■■□□□ 1.05
TSPAN9O75954 AC044849.2-201ENST00000606596 710 ntBASIC21.6■■□□□ 1.05
TSPAN9O75954 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms