Protein–RNA interactions for Protein: A6NCQ9

RNF222, RING finger protein 222, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF222A6NCQ9 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RNF222A6NCQ9 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
RNF222A6NCQ9 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.26■□□□□ 0.99
RNF222A6NCQ9 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RNF222A6NCQ9 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.25■□□□□ 0.99
RNF222A6NCQ9 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.25■□□□□ 0.99
RNF222A6NCQ9 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF222A6NCQ9 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF222A6NCQ9 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF222A6NCQ9 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF222A6NCQ9 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF222A6NCQ9 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF222A6NCQ9 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF222A6NCQ9 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RNF222A6NCQ9 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF222A6NCQ9 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.23■□□□□ 0.99
RNF222A6NCQ9 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF222A6NCQ9 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF222A6NCQ9 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
RNF222A6NCQ9 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF222A6NCQ9 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF222A6NCQ9 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
RNF222A6NCQ9 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.21■□□□□ 0.99
RNF222A6NCQ9 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
RNF222A6NCQ9 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RNF222A6NCQ9 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF222A6NCQ9 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF222A6NCQ9 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF222A6NCQ9 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF222A6NCQ9 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC21.19■□□□□ 0.98
RNF222A6NCQ9 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
RNF222A6NCQ9 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.19■□□□□ 0.98
RNF222A6NCQ9 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
RNF222A6NCQ9 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.18■□□□□ 0.98
RNF222A6NCQ9 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RNF222A6NCQ9 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF222A6NCQ9 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF222A6NCQ9 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF222A6NCQ9 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF222A6NCQ9 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF222A6NCQ9 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF222A6NCQ9 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF222A6NCQ9 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RNF222A6NCQ9 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF222A6NCQ9 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF222A6NCQ9 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
RNF222A6NCQ9 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF222A6NCQ9 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF222A6NCQ9 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF222A6NCQ9 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF222A6NCQ9 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF222A6NCQ9 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF222A6NCQ9 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF222A6NCQ9 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RNF222A6NCQ9 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF222A6NCQ9 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF222A6NCQ9 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF222A6NCQ9 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF222A6NCQ9 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
RNF222A6NCQ9 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF222A6NCQ9 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF222A6NCQ9 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF222A6NCQ9 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.11■□□□□ 0.97
RNF222A6NCQ9 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF222A6NCQ9 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF222A6NCQ9 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF222A6NCQ9 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
RNF222A6NCQ9 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF222A6NCQ9 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF222A6NCQ9 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF222A6NCQ9 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
RNF222A6NCQ9 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF222A6NCQ9 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RNF222A6NCQ9 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.08■□□□□ 0.97
RNF222A6NCQ9 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RNF222A6NCQ9 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF222A6NCQ9 AC020928.2-201ENST00000588717 2197 ntBASIC21.07■□□□□ 0.96
RNF222A6NCQ9 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF222A6NCQ9 AC091060.1-201ENST00000623524 1766 ntBASIC21.07■□□□□ 0.96
RNF222A6NCQ9 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
RNF222A6NCQ9 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
RNF222A6NCQ9 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF222A6NCQ9 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF222A6NCQ9 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF222A6NCQ9 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF222A6NCQ9 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
RNF222A6NCQ9 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF222A6NCQ9 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.04■□□□□ 0.96
RNF222A6NCQ9 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF222A6NCQ9 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF222A6NCQ9 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF222A6NCQ9 AC093323.1-202ENST00000635031 2045 ntBASIC21.04■□□□□ 0.96
RNF222A6NCQ9 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF222A6NCQ9 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF222A6NCQ9 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RNF222A6NCQ9 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF222A6NCQ9 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF222A6NCQ9 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF222A6NCQ9 LINC01003-201ENST00000564834 1764 ntBASIC21.02■□□□□ 0.96
RNF222A6NCQ9 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms