Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRAV20A0A0B4J274 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRAV20A0A0B4J274 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.77■■□□□ 1.08
TRAV20A0A0B4J274 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC21.77■■□□□ 1.08
TRAV20A0A0B4J274 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAV20A0A0B4J274 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAV20A0A0B4J274 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAV20A0A0B4J274 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAV20A0A0B4J274 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRAV20A0A0B4J274 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.75■■□□□ 1.07
TRAV20A0A0B4J274 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
TRAV20A0A0B4J274 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.75■■□□□ 1.07
TRAV20A0A0B4J274 AC016575.1-201ENST00000607026 382 ntBASIC21.75■■□□□ 1.07
TRAV20A0A0B4J274 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
TRAV20A0A0B4J274 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAV20A0A0B4J274 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAV20A0A0B4J274 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAV20A0A0B4J274 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRAV20A0A0B4J274 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.73■■□□□ 1.07
TRAV20A0A0B4J274 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRAV20A0A0B4J274 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.73■■□□□ 1.07
TRAV20A0A0B4J274 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRAV20A0A0B4J274 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAV20A0A0B4J274 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAV20A0A0B4J274 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAV20A0A0B4J274 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRAV20A0A0B4J274 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRAV20A0A0B4J274 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.71■■□□□ 1.07
TRAV20A0A0B4J274 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
TRAV20A0A0B4J274 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRAV20A0A0B4J274 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRAV20A0A0B4J274 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.7■■□□□ 1.06
TRAV20A0A0B4J274 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.69■■□□□ 1.06
TRAV20A0A0B4J274 CR559946.2-201ENST00000623684 991 ntBASIC21.69■■□□□ 1.06
TRAV20A0A0B4J274 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
TRAV20A0A0B4J274 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRAV20A0A0B4J274 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRAV20A0A0B4J274 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRAV20A0A0B4J274 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRAV20A0A0B4J274 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRAV20A0A0B4J274 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
TRAV20A0A0B4J274 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.66■■□□□ 1.06
TRAV20A0A0B4J274 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.66■■□□□ 1.06
TRAV20A0A0B4J274 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRAV20A0A0B4J274 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAV20A0A0B4J274 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
TRAV20A0A0B4J274 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAV20A0A0B4J274 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.65■■□□□ 1.06
TRAV20A0A0B4J274 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAV20A0A0B4J274 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRAV20A0A0B4J274 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRAV20A0A0B4J274 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRAV20A0A0B4J274 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRAV20A0A0B4J274 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRAV20A0A0B4J274 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRAV20A0A0B4J274 DUX4L13-201ENST00000554103 1267 ntBASIC21.63■■□□□ 1.05
TRAV20A0A0B4J274 DUX4L15-201ENST00000611059 1267 ntBASIC21.63■■□□□ 1.05
TRAV20A0A0B4J274 DUX4L23-201ENST00000615195 1269 ntBASIC21.63■■□□□ 1.05
TRAV20A0A0B4J274 DUX4L24-201ENST00000617576 1269 ntBASIC21.63■■□□□ 1.05
TRAV20A0A0B4J274 DUX4L22-201ENST00000618238 1269 ntBASIC21.63■■□□□ 1.05
TRAV20A0A0B4J274 DUX4L20-201ENST00000619712 1269 ntBASIC21.63■■□□□ 1.05
TRAV20A0A0B4J274 DUX4L21-201ENST00000622058 1269 ntBASIC21.63■■□□□ 1.05
TRAV20A0A0B4J274 DUX4L10-201ENST00000622460 1267 ntBASIC21.63■■□□□ 1.05
TRAV20A0A0B4J274 DUX4L25-201ENST00000624915 1269 ntBASIC21.63■■□□□ 1.05
TRAV20A0A0B4J274 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
TRAV20A0A0B4J274 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRAV20A0A0B4J274 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
TRAV20A0A0B4J274 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
TRAV20A0A0B4J274 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRAV20A0A0B4J274 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.61■■□□□ 1.05
TRAV20A0A0B4J274 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRAV20A0A0B4J274 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRAV20A0A0B4J274 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.6■■□□□ 1.05
TRAV20A0A0B4J274 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRAV20A0A0B4J274 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
TRAV20A0A0B4J274 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRAV20A0A0B4J274 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRAV20A0A0B4J274 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRAV20A0A0B4J274 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.59■■□□□ 1.05
TRAV20A0A0B4J274 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRAV20A0A0B4J274 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
TRAV20A0A0B4J274 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
TRAV20A0A0B4J274 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
TRAV20A0A0B4J274 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.57■■□□□ 1.04
TRAV20A0A0B4J274 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.57■■□□□ 1.04
TRAV20A0A0B4J274 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRAV20A0A0B4J274 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRAV20A0A0B4J274 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRAV20A0A0B4J274 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
TRAV20A0A0B4J274 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.56■■□□□ 1.04
TRAV20A0A0B4J274 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRAV20A0A0B4J274 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
TRAV20A0A0B4J274 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.55■■□□□ 1.04
TRAV20A0A0B4J274 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.55■■□□□ 1.04
TRAV20A0A0B4J274 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.55■■□□□ 1.04
TRAV20A0A0B4J274 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.55■■□□□ 1.04
TRAV20A0A0B4J274 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
TRAV20A0A0B4J274 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRAV20A0A0B4J274 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRAV20A0A0B4J274 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms