Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRAV12-3A0A0B4J271 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC19.14■□□□□ 0.65
TRAV12-3A0A0B4J271 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV12-3A0A0B4J271 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV12-3A0A0B4J271 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV12-3A0A0B4J271 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV12-3A0A0B4J271 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV12-3A0A0B4J271 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV12-3A0A0B4J271 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC19.12■□□□□ 0.65
TRAV12-3A0A0B4J271 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC19.11■□□□□ 0.65
TRAV12-3A0A0B4J271 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV12-3A0A0B4J271 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV12-3A0A0B4J271 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV12-3A0A0B4J271 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV12-3A0A0B4J271 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV12-3A0A0B4J271 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC19.1■□□□□ 0.65
TRAV12-3A0A0B4J271 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.1■□□□□ 0.65
TRAV12-3A0A0B4J271 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
TRAV12-3A0A0B4J271 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.1■□□□□ 0.65
TRAV12-3A0A0B4J271 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV12-3A0A0B4J271 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV12-3A0A0B4J271 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
TRAV12-3A0A0B4J271 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.1■□□□□ 0.65
TRAV12-3A0A0B4J271 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
TRAV12-3A0A0B4J271 MIR762-201ENST00000390236 83 ntBASIC19.09■□□□□ 0.65
TRAV12-3A0A0B4J271 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.09■□□□□ 0.65
TRAV12-3A0A0B4J271 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV12-3A0A0B4J271 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV12-3A0A0B4J271 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TRAV12-3A0A0B4J271 AC142086.6-201ENST00000621154 1765 ntBASIC19.09■□□□□ 0.65
TRAV12-3A0A0B4J271 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
TRAV12-3A0A0B4J271 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TRAV12-3A0A0B4J271 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
TRAV12-3A0A0B4J271 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV12-3A0A0B4J271 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC19.07■□□□□ 0.64
TRAV12-3A0A0B4J271 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
TRAV12-3A0A0B4J271 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV12-3A0A0B4J271 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV12-3A0A0B4J271 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV12-3A0A0B4J271 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAV12-3A0A0B4J271 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV12-3A0A0B4J271 DRD5P2-201ENST00000421395 2012 ntBASIC19.06■□□□□ 0.64
TRAV12-3A0A0B4J271 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV12-3A0A0B4J271 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV12-3A0A0B4J271 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV12-3A0A0B4J271 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.05■□□□□ 0.64
TRAV12-3A0A0B4J271 RPS2-209ENST00000529806 993 ntTSL 3 BASIC19.05■□□□□ 0.64
TRAV12-3A0A0B4J271 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.05■□□□□ 0.64
TRAV12-3A0A0B4J271 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV12-3A0A0B4J271 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV12-3A0A0B4J271 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV12-3A0A0B4J271 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV12-3A0A0B4J271 AC127502.1-201ENST00000399971 1502 ntBASIC19.05■□□□□ 0.64
TRAV12-3A0A0B4J271 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV12-3A0A0B4J271 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV12-3A0A0B4J271 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV12-3A0A0B4J271 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV12-3A0A0B4J271 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV12-3A0A0B4J271 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV12-3A0A0B4J271 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
TRAV12-3A0A0B4J271 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
TRAV12-3A0A0B4J271 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV12-3A0A0B4J271 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC19.02■□□□□ 0.64
TRAV12-3A0A0B4J271 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
TRAV12-3A0A0B4J271 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV12-3A0A0B4J271 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.01■□□□□ 0.63
TRAV12-3A0A0B4J271 SUZ12P1-203ENST00000578195 985 ntBASIC19.01■□□□□ 0.63
TRAV12-3A0A0B4J271 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV12-3A0A0B4J271 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV12-3A0A0B4J271 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TRAV12-3A0A0B4J271 AC005559.1-201ENST00000589661 871 ntBASIC19■□□□□ 0.63
TRAV12-3A0A0B4J271 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
TRAV12-3A0A0B4J271 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV12-3A0A0B4J271 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV12-3A0A0B4J271 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV12-3A0A0B4J271 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV12-3A0A0B4J271 HNRNPLP2-201ENST00000568980 1570 ntBASIC18.98■□□□□ 0.63
TRAV12-3A0A0B4J271 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV12-3A0A0B4J271 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV12-3A0A0B4J271 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV12-3A0A0B4J271 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
TRAV12-3A0A0B4J271 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAV12-3A0A0B4J271 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAV12-3A0A0B4J271 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV12-3A0A0B4J271 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
TRAV12-3A0A0B4J271 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC18.97■□□□□ 0.63
TRAV12-3A0A0B4J271 AP004833.2-201ENST00000532228 1454 ntBASIC18.97■□□□□ 0.63
TRAV12-3A0A0B4J271 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TRAV12-3A0A0B4J271 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC18.96■□□□□ 0.63
TRAV12-3A0A0B4J271 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV12-3A0A0B4J271 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV12-3A0A0B4J271 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV12-3A0A0B4J271 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC18.96■□□□□ 0.63
TRAV12-3A0A0B4J271 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC18.95■□□□□ 0.62
TRAV12-3A0A0B4J271 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC18.95■□□□□ 0.62
TRAV12-3A0A0B4J271 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV12-3A0A0B4J271 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV12-3A0A0B4J271 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV12-3A0A0B4J271 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV12-3A0A0B4J271 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms