Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBQLN2Q9UHD9 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
UBQLN2Q9UHD9 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.84■□□□□ 0.29
UBQLN2Q9UHD9 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UBQLN2Q9UHD9 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.84■□□□□ 0.29
UBQLN2Q9UHD9 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.84■□□□□ 0.29
UBQLN2Q9UHD9 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBQLN2Q9UHD9 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.84■□□□□ 0.29
UBQLN2Q9UHD9 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
UBQLN2Q9UHD9 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN2Q9UHD9 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN2Q9UHD9 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.83■□□□□ 0.28
UBQLN2Q9UHD9 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN2Q9UHD9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.83■□□□□ 0.28
UBQLN2Q9UHD9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.83■□□□□ 0.28
UBQLN2Q9UHD9 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.83■□□□□ 0.28
UBQLN2Q9UHD9 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN2Q9UHD9 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN2Q9UHD9 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN2Q9UHD9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC16.83■□□□□ 0.28
UBQLN2Q9UHD9 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.83■□□□□ 0.28
UBQLN2Q9UHD9 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.83■□□□□ 0.28
UBQLN2Q9UHD9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
UBQLN2Q9UHD9 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
UBQLN2Q9UHD9 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
UBQLN2Q9UHD9 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN2Q9UHD9 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN2Q9UHD9 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBQLN2Q9UHD9 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN2Q9UHD9 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN2Q9UHD9 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN2Q9UHD9 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN2Q9UHD9 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN2Q9UHD9 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN2Q9UHD9 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN2Q9UHD9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN2Q9UHD9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
UBQLN2Q9UHD9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC16.82■□□□□ 0.28
UBQLN2Q9UHD9 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
UBQLN2Q9UHD9 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.82■□□□□ 0.28
UBQLN2Q9UHD9 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
UBQLN2Q9UHD9 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
UBQLN2Q9UHD9 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.82■□□□□ 0.28
UBQLN2Q9UHD9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN2Q9UHD9 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN2Q9UHD9 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN2Q9UHD9 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN2Q9UHD9 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.82■□□□□ 0.28
UBQLN2Q9UHD9 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN2Q9UHD9 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
UBQLN2Q9UHD9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBQLN2Q9UHD9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC16.81■□□□□ 0.28
UBQLN2Q9UHD9 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
UBQLN2Q9UHD9 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN2Q9UHD9 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.81■□□□□ 0.28
UBQLN2Q9UHD9 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.81■□□□□ 0.28
UBQLN2Q9UHD9 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.81■□□□□ 0.28
UBQLN2Q9UHD9 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN2Q9UHD9 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN2Q9UHD9 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN2Q9UHD9 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN2Q9UHD9 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN2Q9UHD9 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN2Q9UHD9 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
UBQLN2Q9UHD9 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN2Q9UHD9 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN2Q9UHD9 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
UBQLN2Q9UHD9 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN2Q9UHD9 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
UBQLN2Q9UHD9 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN2Q9UHD9 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN2Q9UHD9 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN2Q9UHD9 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN2Q9UHD9 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN2Q9UHD9 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.81■□□□□ 0.28
UBQLN2Q9UHD9 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.81■□□□□ 0.28
UBQLN2Q9UHD9 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN2Q9UHD9 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
UBQLN2Q9UHD9 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC16.8■□□□□ 0.28
UBQLN2Q9UHD9 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
UBQLN2Q9UHD9 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
UBQLN2Q9UHD9 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN2Q9UHD9 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN2Q9UHD9 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN2Q9UHD9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
UBQLN2Q9UHD9 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN2Q9UHD9 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.8■□□□□ 0.28
UBQLN2Q9UHD9 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.8■□□□□ 0.28
UBQLN2Q9UHD9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC16.8■□□□□ 0.28
UBQLN2Q9UHD9 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.8■□□□□ 0.28
UBQLN2Q9UHD9 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.8■□□□□ 0.28
UBQLN2Q9UHD9 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN2Q9UHD9 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN2Q9UHD9 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.8■□□□□ 0.28
UBQLN2Q9UHD9 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.8■□□□□ 0.28
UBQLN2Q9UHD9 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN2Q9UHD9 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN2Q9UHD9 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.8■□□□□ 0.28
UBQLN2Q9UHD9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC16.79■□□□□ 0.28
UBQLN2Q9UHD9 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms