Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
RETREG2Q8NC44 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
RETREG2Q8NC44 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RETREG2Q8NC44 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC22.63■■□□□ 1.21
RETREG2Q8NC44 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
RETREG2Q8NC44 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RETREG2Q8NC44 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RETREG2Q8NC44 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
RETREG2Q8NC44 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
RETREG2Q8NC44 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
RETREG2Q8NC44 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC22.62■■□□□ 1.21
RETREG2Q8NC44 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RETREG2Q8NC44 RPS2P55-201ENST00000397318 883 ntBASIC22.62■■□□□ 1.21
RETREG2Q8NC44 GGT1-206ENST00000404223 952 ntTSL 2 BASIC22.62■■□□□ 1.21
RETREG2Q8NC44 FAM210CP-201ENST00000445714 574 ntBASIC22.62■■□□□ 1.21
RETREG2Q8NC44 AC107956.1-201ENST00000494359 873 ntBASIC22.62■■□□□ 1.21
RETREG2Q8NC44 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC22.62■■□□□ 1.21
RETREG2Q8NC44 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC22.62■■□□□ 1.21
RETREG2Q8NC44 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
RETREG2Q8NC44 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RETREG2Q8NC44 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RETREG2Q8NC44 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RETREG2Q8NC44 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC22.62■■□□□ 1.21
RETREG2Q8NC44 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RETREG2Q8NC44 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RETREG2Q8NC44 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RETREG2Q8NC44 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
RETREG2Q8NC44 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RETREG2Q8NC44 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 MIR1224-201ENST00000408193 85 ntBASIC22.61■■□□□ 1.21
RETREG2Q8NC44 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 THEM4-205ENST00000489410 643 ntTSL 2 BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 AC233702.5-201ENST00000584107 538 ntBASIC22.61■■□□□ 1.21
RETREG2Q8NC44 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 AP001412.1-201ENST00000608405 714 ntBASIC22.61■■□□□ 1.21
RETREG2Q8NC44 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 ADM-207ENST00000530439 1839 ntTSL 2 BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 AC007225.1-201ENST00000566331 1836 ntBASIC22.61■■□□□ 1.21
RETREG2Q8NC44 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
RETREG2Q8NC44 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RETREG2Q8NC44 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.6■■□□□ 1.21
RETREG2Q8NC44 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RETREG2Q8NC44 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RETREG2Q8NC44 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RETREG2Q8NC44 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RETREG2Q8NC44 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RETREG2Q8NC44 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
RETREG2Q8NC44 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RETREG2Q8NC44 LY6E-205ENST00000519611 635 ntTSL 3 BASIC22.6■■□□□ 1.21
RETREG2Q8NC44 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC22.6■■□□□ 1.21
RETREG2Q8NC44 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC22.6■■□□□ 1.21
RETREG2Q8NC44 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RETREG2Q8NC44 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC22.6■■□□□ 1.21
RETREG2Q8NC44 BRWD1-AS2-201ENST00000603064 1028 ntBASIC22.6■■□□□ 1.21
RETREG2Q8NC44 MTDHP1-201ENST00000605323 784 ntBASIC22.6■■□□□ 1.21
RETREG2Q8NC44 AL023875.1-201ENST00000640777 796 ntBASIC22.6■■□□□ 1.21
RETREG2Q8NC44 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
RETREG2Q8NC44 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RETREG2Q8NC44 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RETREG2Q8NC44 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RETREG2Q8NC44 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22.6■■□□□ 1.21
RETREG2Q8NC44 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RETREG2Q8NC44 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RETREG2Q8NC44 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RETREG2Q8NC44 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
RETREG2Q8NC44 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
RETREG2Q8NC44 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RETREG2Q8NC44 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RETREG2Q8NC44 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC22.59■■□□□ 1.21
RETREG2Q8NC44 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms