Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC00575Q6W349 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
LINC00575Q6W349 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00575Q6W349 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
LINC00575Q6W349 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00575Q6W349 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00575Q6W349 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC00575Q6W349 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
LINC00575Q6W349 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00575Q6W349 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00575Q6W349 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00575Q6W349 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00575Q6W349 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00575Q6W349 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00575Q6W349 DPP3P2-201ENST00000416030 1696 ntBASIC12.65□□□□□ -0.38
LINC00575Q6W349 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00575Q6W349 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00575Q6W349 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00575Q6W349 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00575Q6W349 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00575Q6W349 PTCHD3P2-201ENST00000424937 1205 ntBASIC12.65□□□□□ -0.38
LINC00575Q6W349 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00575Q6W349 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00575Q6W349 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC00575Q6W349 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00575Q6W349 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
LINC00575Q6W349 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00575Q6W349 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00575Q6W349 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC12.65□□□□□ -0.38
LINC00575Q6W349 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00575Q6W349 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC00575Q6W349 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00575Q6W349 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
LINC00575Q6W349 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00575Q6W349 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00575Q6W349 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC00575Q6W349 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
LINC00575Q6W349 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
LINC00575Q6W349 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC12.65□□□□□ -0.39
LINC00575Q6W349 AC061975.6-201ENST00000579045 1553 ntBASIC12.64□□□□□ -0.39
LINC00575Q6W349 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
LINC00575Q6W349 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
LINC00575Q6W349 STK25-205ENST00000405883 1904 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00575Q6W349 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00575Q6W349 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00575Q6W349 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
LINC00575Q6W349 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00575Q6W349 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC12.64□□□□□ -0.39
LINC00575Q6W349 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00575Q6W349 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
LINC00575Q6W349 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC12.64□□□□□ -0.39
LINC00575Q6W349 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00575Q6W349 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00575Q6W349 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC12.64□□□□□ -0.39
LINC00575Q6W349 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00575Q6W349 AC007613.1-201ENST00000572811 2597 ntBASIC12.64□□□□□ -0.39
LINC00575Q6W349 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC12.64□□□□□ -0.39
LINC00575Q6W349 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00575Q6W349 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
LINC00575Q6W349 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00575Q6W349 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00575Q6W349 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC12.64□□□□□ -0.39
LINC00575Q6W349 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00575Q6W349 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00575Q6W349 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
LINC00575Q6W349 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00575Q6W349 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00575Q6W349 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00575Q6W349 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
LINC00575Q6W349 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00575Q6W349 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00575Q6W349 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00575Q6W349 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00575Q6W349 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00575Q6W349 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00575Q6W349 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00575Q6W349 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00575Q6W349 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00575Q6W349 AL032819.2-201ENST00000624543 2162 ntBASIC12.63□□□□□ -0.39
LINC00575Q6W349 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00575Q6W349 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00575Q6W349 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00575Q6W349 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
LINC00575Q6W349 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00575Q6W349 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC00575Q6W349 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00575Q6W349 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
LINC00575Q6W349 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00575Q6W349 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
LINC00575Q6W349 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00575Q6W349 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00575Q6W349 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
LINC00575Q6W349 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00575Q6W349 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00575Q6W349 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00575Q6W349 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC12.63□□□□□ -0.39
LINC00575Q6W349 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC00575Q6W349 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00575Q6W349 AC053503.5-201ENST00000601508 636 ntBASIC12.63□□□□□ -0.39
LINC00575Q6W349 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms