Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.82■□□□□ 0.6
LPCAT4Q643R3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
LPCAT4Q643R3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LPCAT4Q643R3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.82■□□□□ 0.6
LPCAT4Q643R3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.82■□□□□ 0.6
LPCAT4Q643R3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LPCAT4Q643R3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LPCAT4Q643R3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.82■□□□□ 0.6
LPCAT4Q643R3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LPCAT4Q643R3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LPCAT4Q643R3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LPCAT4Q643R3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LPCAT4Q643R3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LPCAT4Q643R3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
LPCAT4Q643R3 AC061975.6-201ENST00000579045 1553 ntBASIC18.81■□□□□ 0.6
LPCAT4Q643R3 SYT6-210ENST00000641643 1587 ntBASIC18.81■□□□□ 0.6
LPCAT4Q643R3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
LPCAT4Q643R3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LPCAT4Q643R3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.81■□□□□ 0.6
LPCAT4Q643R3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LPCAT4Q643R3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.81■□□□□ 0.6
LPCAT4Q643R3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
LPCAT4Q643R3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LPCAT4Q643R3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
LPCAT4Q643R3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.81■□□□□ 0.6
LPCAT4Q643R3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LPCAT4Q643R3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.81■□□□□ 0.6
LPCAT4Q643R3 AP004607.4-201ENST00000530158 1459 ntBASIC18.81■□□□□ 0.6
LPCAT4Q643R3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
LPCAT4Q643R3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.81■□□□□ 0.6
LPCAT4Q643R3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LPCAT4Q643R3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LPCAT4Q643R3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LPCAT4Q643R3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
LPCAT4Q643R3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LPCAT4Q643R3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LPCAT4Q643R3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
LPCAT4Q643R3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LPCAT4Q643R3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LPCAT4Q643R3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LPCAT4Q643R3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LPCAT4Q643R3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.8■□□□□ 0.6
LPCAT4Q643R3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.8■□□□□ 0.6
LPCAT4Q643R3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LPCAT4Q643R3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LPCAT4Q643R3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.8■□□□□ 0.6
LPCAT4Q643R3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LPCAT4Q643R3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LPCAT4Q643R3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
LPCAT4Q643R3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LPCAT4Q643R3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LPCAT4Q643R3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
LPCAT4Q643R3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.8■□□□□ 0.6
LPCAT4Q643R3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LPCAT4Q643R3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.8■□□□□ 0.6
LPCAT4Q643R3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.8■□□□□ 0.6
LPCAT4Q643R3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.8■□□□□ 0.6
LPCAT4Q643R3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LPCAT4Q643R3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.79■□□□□ 0.6
LPCAT4Q643R3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
LPCAT4Q643R3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.79■□□□□ 0.6
LPCAT4Q643R3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LPCAT4Q643R3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.79■□□□□ 0.6
LPCAT4Q643R3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
LPCAT4Q643R3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LPCAT4Q643R3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LPCAT4Q643R3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
LPCAT4Q643R3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LPCAT4Q643R3 AC239859.2-201ENST00000444165 318 ntBASIC18.79■□□□□ 0.6
LPCAT4Q643R3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LPCAT4Q643R3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LPCAT4Q643R3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LPCAT4Q643R3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LPCAT4Q643R3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
LPCAT4Q643R3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LPCAT4Q643R3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
LPCAT4Q643R3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LPCAT4Q643R3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LPCAT4Q643R3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LPCAT4Q643R3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LPCAT4Q643R3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LPCAT4Q643R3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LPCAT4Q643R3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LPCAT4Q643R3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LPCAT4Q643R3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LPCAT4Q643R3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LPCAT4Q643R3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LPCAT4Q643R3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LPCAT4Q643R3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LPCAT4Q643R3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LPCAT4Q643R3 SLC47A1P1-202ENST00000449666 945 ntBASIC18.78■□□□□ 0.6
LPCAT4Q643R3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.78■□□□□ 0.6
LPCAT4Q643R3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LPCAT4Q643R3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
LPCAT4Q643R3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.78■□□□□ 0.6
LPCAT4Q643R3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LPCAT4Q643R3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LPCAT4Q643R3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LPCAT4Q643R3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
LPCAT4Q643R3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms