Protein–RNA interactions for Protein: P53939

NIS1, Protein NIS1, yeastyeast

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NIS1P53939 KCS1YDR017C 3153 nt2.26□□□□□ -2.05
NIS1P53939 snR47snR47 99 nt2.24□□□□□ -2.05
NIS1P53939 SCD5YOR329C 2619 nt2.22□□□□□ -2.05
NIS1P53939 MGA2YIR033W 3342 nt2.22□□□□□ -2.05
NIS1P53939 APL3YBL037W 3078 nt2.22□□□□□ -2.05
NIS1P53939 YLR286W-AYLR286W-A 135 nt2.22□□□□□ -2.05
NIS1P53939 UBR2YLR024C 5619 nt2.22□□□□□ -2.05
NIS1P53939 SEC8YPR055W 3198 nt2.22□□□□□ -2.05
NIS1P53939 ASE1YOR058C 2658 nt2.21□□□□□ -2.06
NIS1P53939 AZF1YOR113W 2745 nt2.2□□□□□ -2.06
NIS1P53939 PRP16YKR086W 3216 nt2.19□□□□□ -2.06
NIS1P53939 IRA2YOL081W 9240 nt2.19□□□□□ -2.06
NIS1P53939 snR64snR64 101 nt2.19□□□□□ -2.06
NIS1P53939 GLG1YKR058W 1851 nt2.18□□□□□ -2.06
NIS1P53939 UBP3YER151C 2739 nt2.18□□□□□ -2.06
NIS1P53939 SAC3YDR159W 3906 nt2.18□□□□□ -2.06
NIS1P53939 UBP2YOR124C 3819 nt2.18□□□□□ -2.06
NIS1P53939 SEC3YER008C 4011 nt2.17□□□□□ -2.06
NIS1P53939 UTP22YGR090W 3714 nt2.17□□□□□ -2.06
NIS1P53939 GEA2YEL022W 4380 nt2.17□□□□□ -2.06
NIS1P53939 BNI1YNL271C 5862 nt2.16□□□□□ -2.06
NIS1P53939 NNF2YGR089W 2811 nt2.15□□□□□ -2.06
NIS1P53939 YDR371C-AYDR371C-A 105 nt2.15□□□□□ -2.07
NIS1P53939 YLR399W-AYLR399W-A 105 nt2.14□□□□□ -2.07
NIS1P53939 YSP1YHR155W 3687 nt2.14□□□□□ -2.07
NIS1P53939 ORC3YLL004W 1851 nt2.14□□□□□ -2.07
NIS1P53939 SWI4YER111C 3282 nt2.13□□□□□ -2.07
NIS1P53939 CSF1YLR087C 8877 nt2.13□□□□□ -2.07
NIS1P53939 TOR2YKL203C 7425 nt2.13□□□□□ -2.07
NIS1P53939 NUP145YGL092W 3954 nt2.12□□□□□ -2.07
NIS1P53939 MSN5YDR335W 3675 nt2.12□□□□□ -2.07
NIS1P53939 PIK1YNL267W 3201 nt2.11□□□□□ -2.07
NIS1P53939 ULP2YIL031W 3105 nt2.1□□□□□ -2.07
NIS1P53939 tD(GUC)QtD(GUC)Q 75 nt2.09□□□□□ -2.07
NIS1P53939 snR50snR50 90 nt2.09□□□□□ -2.07
NIS1P53939 VPS13YLL040C 9435 nt2.08□□□□□ -2.08
NIS1P53939 BPH1YCR032W 6504 nt2.06□□□□□ -2.08
NIS1P53939 TMA7YLR262C-A 195 nt2.06□□□□□ -2.08
NIS1P53939 CLU1YMR012W 3834 nt2.06□□□□□ -2.08
NIS1P53939 YPR160W-AYPR160W-A 81 nt2.06□□□□□ -2.08
NIS1P53939 tN(GUU)QtN(GUU)Q 71 nt2.05□□□□□ -2.08
NIS1P53939 YLR299C-AYLR299C-A 93 nt2.05□□□□□ -2.08
NIS1P53939 TFC3YAL001C 3483 nt2.05□□□□□ -2.08
NIS1P53939 YLR419WYLR419W 4308 nt2.04□□□□□ -2.08
NIS1P53939 SEC16YPL085W 6588 nt2.01□□□□□ -2.09
NIS1P53939 USO1YDL058W 5373 nt2□□□□□ -2.09
NIS1P53939 YBR109W-AYBR109W-A 225 nt2□□□□□ -2.09
NIS1P53939 SXM1YDR395W 2835 nt2□□□□□ -2.09
NIS1P53939 YOL098CYOL098C 3114 nt1.99□□□□□ -2.09
NIS1P53939 DNF1YER166W 4716 nt1.98□□□□□ -2.09
NIS1P53939 IRC20YLR247C 4671 nt1.98□□□□□ -2.09
NIS1P53939 BST1YFL025C 3090 nt1.97□□□□□ -2.09
NIS1P53939 YKL225WYKL225W 348 nt1.97□□□□□ -2.09
NIS1P53939 YDL159C-BYDL159C-B 177 nt1.96□□□□□ -2.1
NIS1P53939 EST1YLR233C 2100 nt1.96□□□□□ -2.1
NIS1P53939 snR69snR69 101 nt1.95□□□□□ -2.1
NIS1P53939 BRE1YDL074C 2103 nt1.94□□□□□ -2.1
NIS1P53939 YMR045CYMR045C 5268 nt1.94□□□□□ -2.1
NIS1P53939 NEO1YIL048W 3456 nt1.94□□□□□ -2.1
NIS1P53939 MON2YNL297C 4911 nt1.93□□□□□ -2.1
NIS1P53939 PKH3YDR466W 2697 nt1.93□□□□□ -2.1
NIS1P53939 YOR093CYOR093C 4947 nt1.92□□□□□ -2.1
NIS1P53939 YMR247W-AYMR247W-A 144 nt1.92□□□□□ -2.1
NIS1P53939 RDS3YPR094W 324 nt1.91□□□□□ -2.1
NIS1P53939 CSE1YGL238W 2883 nt1.91□□□□□ -2.1
NIS1P53939 FAB1YFR019W 6837 nt1.89□□□□□ -2.11
NIS1P53939 NUP188YML103C 4968 nt1.89□□□□□ -2.11
NIS1P53939 PET127YOR017W 2403 nt1.89□□□□□ -2.11
NIS1P53939 MSH3YCR092C 3057 nt1.89□□□□□ -2.11
NIS1P53939 HUG1YML058W-A 207 nt1.88□□□□□ -2.11
NIS1P53939 PEP1YBL017C 4740 nt1.87□□□□□ -2.11
NIS1P53939 NUP192YJL039C 5052 nt1.87□□□□□ -2.11
NIS1P53939 EST2YLR318W 2655 nt1.87□□□□□ -2.11
NIS1P53939 YHR214C-BYHR214C-B 5382 nt1.86□□□□□ -2.11
NIS1P53939 YHR180C-BYHR180C-B 105 nt1.86□□□□□ -2.11
NIS1P53939 TRM732YMR259C 4263 nt1.85□□□□□ -2.11
NIS1P53939 YJL077W-AYJL077W-A 87 nt1.85□□□□□ -2.11
NIS1P53939 YMR272W-BYMR272W-B 108 nt1.84□□□□□ -2.11
NIS1P53939 PMD1YER132C 5262 nt1.84□□□□□ -2.11
NIS1P53939 NST1YNL091W 3723 nt1.83□□□□□ -2.12
NIS1P53939 RPL41AYDL184C 78 nt1.83□□□□□ -2.12
NIS1P53939 tT(UGU)HtT(UGU)H 72 nt1.83□□□□□ -2.12
NIS1P53939 SPP41YDR464W 4308 nt1.83□□□□□ -2.12
NIS1P53939 FKS1YLR342W 5631 nt1.81□□□□□ -2.12
NIS1P53939 YML054C-AYML054C-A 159 nt1.8□□□□□ -2.12
NIS1P53939 YBR296C-AYBR296C-A 120 nt1.79□□□□□ -2.12
NIS1P53939 DNF3YMR162C 4971 nt1.79□□□□□ -2.12
NIS1P53939 SIP4YJL089W 2490 nt1.79□□□□□ -2.12
NIS1P53939 YPL060C-AYPL060C-A 3315 nt1.79□□□□□ -2.12
NIS1P53939 CFT1YDR301W 4074 nt1.78□□□□□ -2.12
NIS1P53939 DGR1YNL130C-A 147 nt1.78□□□□□ -2.12
NIS1P53939 CAT8YMR280C 4302 nt1.77□□□□□ -2.13
NIS1P53939 YLL006W-AYLL006W-A 177 nt1.77□□□□□ -2.13
NIS1P53939 CDC39YCR093W 6327 nt1.77□□□□□ -2.13
NIS1P53939 YKL096C-BYKL096C-B 150 nt1.76□□□□□ -2.13
NIS1P53939 BUL2YML111W 2763 nt1.75□□□□□ -2.13
NIS1P53939 YLR149C-AYLR149C-A 87 nt1.73□□□□□ -2.13
NIS1P53939 NIP1YMR309C 2439 nt1.72□□□□□ -2.13
NIS1P53939 FYV8YGR196C 2454 nt1.72□□□□□ -2.13
NIS1P53939 PAU12YGR294W 363 nt1.71□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 14 ms