Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.21■□□□□ 0.83
HADHAP40939 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
HADHAP40939 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
HADHAP40939 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HADHAP40939 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HADHAP40939 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HADHAP40939 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.2■□□□□ 0.82
HADHAP40939 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HADHAP40939 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.2■□□□□ 0.82
HADHAP40939 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.2■□□□□ 0.82
HADHAP40939 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.2■□□□□ 0.82
HADHAP40939 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.2■□□□□ 0.82
HADHAP40939 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
HADHAP40939 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HADHAP40939 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HADHAP40939 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.2■□□□□ 0.82
HADHAP40939 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HADHAP40939 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HADHAP40939 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
HADHAP40939 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.19■□□□□ 0.82
HADHAP40939 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.19■□□□□ 0.82
HADHAP40939 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.19■□□□□ 0.82
HADHAP40939 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
HADHAP40939 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
HADHAP40939 KRT17P1-201ENST00000399211 1546 ntBASIC20.19■□□□□ 0.82
HADHAP40939 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HADHAP40939 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.19■□□□□ 0.82
HADHAP40939 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
HADHAP40939 GPX1P1-201ENST00000388829 606 ntBASIC20.19■□□□□ 0.82
HADHAP40939 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HADHAP40939 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.19■□□□□ 0.82
HADHAP40939 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.19■□□□□ 0.82
HADHAP40939 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.19■□□□□ 0.82
HADHAP40939 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.19■□□□□ 0.82
HADHAP40939 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.19■□□□□ 0.82
HADHAP40939 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HADHAP40939 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HADHAP40939 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HADHAP40939 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HADHAP40939 DPP3P2-201ENST00000416030 1696 ntBASIC20.19■□□□□ 0.82
HADHAP40939 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.19■□□□□ 0.82
HADHAP40939 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.19■□□□□ 0.82
HADHAP40939 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HADHAP40939 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.18■□□□□ 0.82
HADHAP40939 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
HADHAP40939 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HADHAP40939 PCDHAC2-203ENST00000615316 3011 ntBASIC20.18■□□□□ 0.82
HADHAP40939 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.18■□□□□ 0.82
HADHAP40939 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.18■□□□□ 0.82
HADHAP40939 SLC29A4P1-201ENST00000398760 971 ntBASIC20.18■□□□□ 0.82
HADHAP40939 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.18■□□□□ 0.82
HADHAP40939 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HADHAP40939 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
HADHAP40939 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.18■□□□□ 0.82
HADHAP40939 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HADHAP40939 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HADHAP40939 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.18■□□□□ 0.82
HADHAP40939 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HADHAP40939 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
HADHAP40939 SMG8-203ENST00000578922 2178 ntBASIC20.18■□□□□ 0.82
HADHAP40939 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
HADHAP40939 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
HADHAP40939 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.17■□□□□ 0.82
HADHAP40939 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
HADHAP40939 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HADHAP40939 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
HADHAP40939 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HADHAP40939 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.17■□□□□ 0.82
HADHAP40939 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HADHAP40939 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
HADHAP40939 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.17■□□□□ 0.82
HADHAP40939 BX276092.2-201ENST00000417668 665 ntBASIC20.17■□□□□ 0.82
HADHAP40939 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.17■□□□□ 0.82
HADHAP40939 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.17■□□□□ 0.82
HADHAP40939 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HADHAP40939 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
HADHAP40939 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.17■□□□□ 0.82
HADHAP40939 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HADHAP40939 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.17■□□□□ 0.82
HADHAP40939 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
HADHAP40939 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HADHAP40939 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.17■□□□□ 0.82
HADHAP40939 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HADHAP40939 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HADHAP40939 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HADHAP40939 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HADHAP40939 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HADHAP40939 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.16■□□□□ 0.82
HADHAP40939 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HADHAP40939 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.16■□□□□ 0.82
HADHAP40939 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.16■□□□□ 0.82
HADHAP40939 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HADHAP40939 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HADHAP40939 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HADHAP40939 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.16■□□□□ 0.82
HADHAP40939 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.16■□□□□ 0.82
HADHAP40939 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HADHAP40939 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HADHAP40939 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
HADHAP40939 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms