Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPL13AP40429 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
RPL13AP40429 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC13.79□□□□□ -0.2
RPL13AP40429 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC13.79□□□□□ -0.2
RPL13AP40429 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC13.79□□□□□ -0.2
RPL13AP40429 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPL13AP40429 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RPL13AP40429 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RPL13AP40429 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL13AP40429 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RPL13AP40429 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC13.78□□□□□ -0.2
RPL13AP40429 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
RPL13AP40429 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL13AP40429 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL13AP40429 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL13AP40429 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL13AP40429 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL13AP40429 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC13.78□□□□□ -0.2
RPL13AP40429 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL13AP40429 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL13AP40429 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
RPL13AP40429 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL13AP40429 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC13.78□□□□□ -0.2
RPL13AP40429 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL13AP40429 AC010997.5-201ENST00000609182 354 ntBASIC13.78□□□□□ -0.2
RPL13AP40429 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RPL13AP40429 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RPL13AP40429 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL13AP40429 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.78□□□□□ -0.2
RPL13AP40429 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RPL13AP40429 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.78□□□□□ -0.2
RPL13AP40429 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RPL13AP40429 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL13AP40429 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RPL13AP40429 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL13AP40429 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RPL13AP40429 PLK5-205ENST00000642079 1969 ntBASIC13.78□□□□□ -0.2
RPL13AP40429 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL13AP40429 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC13.78□□□□□ -0.2
RPL13AP40429 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RPL13AP40429 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC13.78□□□□□ -0.2
RPL13AP40429 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RPL13AP40429 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
RPL13AP40429 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
RPL13AP40429 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPL13AP40429 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPL13AP40429 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC13.77□□□□□ -0.21
RPL13AP40429 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPL13AP40429 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPL13AP40429 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
RPL13AP40429 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC13.77□□□□□ -0.21
RPL13AP40429 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPL13AP40429 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RPL13AP40429 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPL13AP40429 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC13.77□□□□□ -0.21
RPL13AP40429 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC13.77□□□□□ -0.21
RPL13AP40429 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPL13AP40429 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RPL13AP40429 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPL13AP40429 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPL13AP40429 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPL13AP40429 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC13.76□□□□□ -0.21
RPL13AP40429 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL13AP40429 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC13.76□□□□□ -0.21
RPL13AP40429 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC13.76□□□□□ -0.21
RPL13AP40429 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL13AP40429 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL13AP40429 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL13AP40429 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL13AP40429 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC13.76□□□□□ -0.21
RPL13AP40429 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL13AP40429 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RPL13AP40429 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL13AP40429 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL13AP40429 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL13AP40429 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL13AP40429 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL13AP40429 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL13AP40429 UNC93B8-201ENST00000511903 705 ntBASIC13.76□□□□□ -0.21
RPL13AP40429 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RPL13AP40429 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL13AP40429 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL13AP40429 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL13AP40429 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
RPL13AP40429 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC13.76□□□□□ -0.21
RPL13AP40429 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL13AP40429 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC13.76□□□□□ -0.21
RPL13AP40429 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
RPL13AP40429 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL13AP40429 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC13.76□□□□□ -0.21
RPL13AP40429 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
RPL13AP40429 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC13.76□□□□□ -0.21
RPL13AP40429 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL13AP40429 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RPL13AP40429 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RPL13AP40429 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
RPL13AP40429 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
RPL13AP40429 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RPL13AP40429 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RPL13AP40429 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms