Protein–RNA interactions for Protein: P40072

SLX8, E3 ubiquitin-protein ligase complex SLX5-SLX8 subunit SLX8, yeastyeast

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SLX8P40072 SWI4YER111C 3282 nt2.16□□□□□ -2.06
SLX8P40072 FKS1YLR342W 5631 nt2.16□□□□□ -2.06
SLX8P40072 YBL071C-BYBL071C-B 99 nt2.16□□□□□ -2.06
SLX8P40072 YDR034C-AYDR034C-A 177 nt2.15□□□□□ -2.07
SLX8P40072 snR190snR190 190 nt2.15□□□□□ -2.07
SLX8P40072 snR14snR14 160 nt2.14□□□□□ -2.07
SLX8P40072 YBL100W-CYBL100W-C 120 nt2.13□□□□□ -2.07
SLX8P40072 RPL26BYGR034W 384 nt2.12□□□□□ -2.07
SLX8P40072 NUP145YGL092W 3954 nt2.12□□□□□ -2.07
SLX8P40072 RAD9YDR217C 3930 nt2.11□□□□□ -2.07
SLX8P40072 RPM2YML091C 3609 nt2.11□□□□□ -2.07
SLX8P40072 BRE1YDL074C 2103 nt2.11□□□□□ -2.07
SLX8P40072 CHS1YNL192W 3396 nt2.1□□□□□ -2.07
SLX8P40072 BPH1YCR032W 6504 nt2.1□□□□□ -2.07
SLX8P40072 UBP2YOR124C 3819 nt2.1□□□□□ -2.07
SLX8P40072 YBR196C-AYBR196C-A 150 nt2.1□□□□□ -2.07
SLX8P40072 SET3YKR029C 2256 nt2.1□□□□□ -2.07
SLX8P40072 PEP1YBL017C 4740 nt2.09□□□□□ -2.07
SLX8P40072 MSN5YDR335W 3675 nt2.08□□□□□ -2.08
SLX8P40072 STO1YMR125W 2586 nt2.07□□□□□ -2.08
SLX8P40072 EST2YLR318W 2655 nt2.07□□□□□ -2.08
SLX8P40072 MON2YNL297C 4911 nt2.07□□□□□ -2.08
SLX8P40072 DGR1YNL130C-A 147 nt2.07□□□□□ -2.08
SLX8P40072 SPP41YDR464W 4308 nt2.07□□□□□ -2.08
SLX8P40072 YHR214C-BYHR214C-B 5382 nt2.07□□□□□ -2.08
SLX8P40072 RPS26AYGL189C 360 nt2.06□□□□□ -2.08
SLX8P40072 YLR419WYLR419W 4308 nt2.06□□□□□ -2.08
SLX8P40072 APL3YBL037W 3078 nt2.06□□□□□ -2.08
SLX8P40072 WAR1YML076C 2835 nt2.05□□□□□ -2.08
SLX8P40072 YOL164W-AYOL164W-A 183 nt2.05□□□□□ -2.08
SLX8P40072 AZF1YOR113W 2745 nt2.05□□□□□ -2.08
SLX8P40072 YGR240C-AYGR240C-A 201 nt2.03□□□□□ -2.08
SLX8P40072 tT(UGU)HtT(UGU)H 72 nt2.02□□□□□ -2.09
SLX8P40072 YBR200W-AYBR200W-A 165 nt2.02□□□□□ -2.09
SLX8P40072 GEA2YEL022W 4380 nt2.01□□□□□ -2.09
SLX8P40072 SEC3YER008C 4011 nt2.01□□□□□ -2.09
SLX8P40072 MEC1YBR136W 7107 nt2□□□□□ -2.09
SLX8P40072 SXM1YDR395W 2835 nt1.99□□□□□ -2.09
SLX8P40072 ASE1YOR058C 2658 nt1.99□□□□□ -2.09
SLX8P40072 BEM3YPL115C 3387 nt1.98□□□□□ -2.09
SLX8P40072 YMR045CYMR045C 5268 nt1.97□□□□□ -2.09
SLX8P40072 SEC10YLR166C 2616 nt1.97□□□□□ -2.09
SLX8P40072 TRM732YMR259C 4263 nt1.96□□□□□ -2.1
SLX8P40072 YDL073WYDL073W 2955 nt1.95□□□□□ -2.1
SLX8P40072 YMR247W-AYMR247W-A 144 nt1.95□□□□□ -2.1
SLX8P40072 PRP16YKR086W 3216 nt1.94□□□□□ -2.1
SLX8P40072 FIG2YCR089W 4830 nt1.94□□□□□ -2.1
SLX8P40072 CFT1YDR301W 4074 nt1.93□□□□□ -2.1
SLX8P40072 SEC8YPR055W 3198 nt1.93□□□□□ -2.1
SLX8P40072 UBP3YER151C 2739 nt1.92□□□□□ -2.1
SLX8P40072 snR47snR47 99 nt1.92□□□□□ -2.1
SLX8P40072 NUP188YML103C 4968 nt1.91□□□□□ -2.1
SLX8P40072 YLR286W-AYLR286W-A 135 nt1.9□□□□□ -2.11
SLX8P40072 snR53snR53 91 nt1.9□□□□□ -2.11
SLX8P40072 BRR2YER172C 6492 nt1.9□□□□□ -2.11
SLX8P40072 NNF2YGR089W 2811 nt1.89□□□□□ -2.11
SLX8P40072 YOR093CYOR093C 4947 nt1.88□□□□□ -2.11
SLX8P40072 PIK1YNL267W 3201 nt1.88□□□□□ -2.11
SLX8P40072 YMR272W-BYMR272W-B 108 nt1.88□□□□□ -2.11
SLX8P40072 DNF3YMR162C 4971 nt1.88□□□□□ -2.11
SLX8P40072 IRC20YLR247C 4671 nt1.87□□□□□ -2.11
SLX8P40072 NUP192YJL039C 5052 nt1.87□□□□□ -2.11
SLX8P40072 YLR399W-AYLR399W-A 105 nt1.86□□□□□ -2.11
SLX8P40072 PMD1YER132C 5262 nt1.84□□□□□ -2.11
SLX8P40072 tN(GUU)QtN(GUU)Q 71 nt1.84□□□□□ -2.11
SLX8P40072 GLG1YKR058W 1851 nt1.84□□□□□ -2.12
SLX8P40072 YSP1YHR155W 3687 nt1.84□□□□□ -2.12
SLX8P40072 ANS1YHR126C 480 nt1.83□□□□□ -2.12
SLX8P40072 ORC3YLL004W 1851 nt1.83□□□□□ -2.12
SLX8P40072 IRA1YBR140C 9279 nt1.81□□□□□ -2.12
SLX8P40072 CDC39YCR093W 6327 nt1.81□□□□□ -2.12
SLX8P40072 snR64snR64 101 nt1.81□□□□□ -2.12
SLX8P40072 tD(GUC)QtD(GUC)Q 75 nt1.81□□□□□ -2.12
SLX8P40072 YPR160W-AYPR160W-A 81 nt1.81□□□□□ -2.12
SLX8P40072 SPC110YDR356W 2835 nt1.81□□□□□ -2.12
SLX8P40072 ULP2YIL031W 3105 nt1.79□□□□□ -2.12
SLX8P40072 VPS15YBR097W 4365 nt1.76□□□□□ -2.13
SLX8P40072 MSH3YCR092C 3057 nt1.76□□□□□ -2.13
SLX8P40072 YLR299C-AYLR299C-A 93 nt1.75□□□□□ -2.13
SLX8P40072 EST1YLR233C 2100 nt1.72□□□□□ -2.13
SLX8P40072 snR50snR50 90 nt1.71□□□□□ -2.14
SLX8P40072 CAT8YMR280C 4302 nt1.7□□□□□ -2.14
SLX8P40072 snR69snR69 101 nt1.69□□□□□ -2.14
SLX8P40072 YDL159C-BYDL159C-B 177 nt1.69□□□□□ -2.14
SLX8P40072 LAA1YJL207C 6045 nt1.68□□□□□ -2.14
SLX8P40072 YDR371C-AYDR371C-A 105 nt1.67□□□□□ -2.14
SLX8P40072 CSE1YGL238W 2883 nt1.66□□□□□ -2.14
SLX8P40072 SSK2YNR031C 4740 nt1.66□□□□□ -2.14
SLX8P40072 HUG1YML058W-A 207 nt1.65□□□□□ -2.15
SLX8P40072 PET127YOR017W 2403 nt1.64□□□□□ -2.15
SLX8P40072 YKL225WYKL225W 348 nt1.64□□□□□ -2.15
SLX8P40072 RDS3YPR094W 324 nt1.64□□□□□ -2.15
SLX8P40072 HKR1YDR420W 5409 nt1.62□□□□□ -2.15
SLX8P40072 YHR180C-BYHR180C-B 105 nt1.59□□□□□ -2.15
SLX8P40072 NST1YNL091W 3723 nt1.59□□□□□ -2.16
SLX8P40072 YLL006W-AYLL006W-A 177 nt1.58□□□□□ -2.16
SLX8P40072 YBR109W-AYBR109W-A 225 nt1.57□□□□□ -2.16
SLX8P40072 YJL077W-AYJL077W-A 87 nt1.56□□□□□ -2.16
SLX8P40072 CCH1YGR217W 6120 nt1.55□□□□□ -2.16
SLX8P40072 RPL41AYDL184C 78 nt1.55□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 70 ms