RNA–Protein interactions for RNA: YGR217W

CCH1, Transcript of Voltage-gated high-affinity calcium channel, yeastyeast

Gene CCH1, Length 6,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCH1YGR217W MON2P48563 1636 aaPredicted RBP5.2□□□□□ -1.58
CCH1YGR217W TY1B-DR4Q07793 1604 aa4.66□□□□□ -1.66
CCH1YGR217W KOG1P38873 1557 aa4.54□□□□□ -1.68
CCH1YGR217W SWR1Q05471 1514 aa4.53□□□□□ -1.68
CCH1YGR217W DNA2P38859 1522 aa4.48□□□□□ -1.69
CCH1YGR217W INO80P53115 1489 aa4.44□□□□□ -1.7
CCH1YGR217W TCB3Q03640 1545 aaKnown RBP4.4□□□□□ -1.71
CCH1YGR217W SPA2P23201 1466 aaKnown RBP4.3□□□□□ -1.72
CCH1YGR217W THO2P53552 1597 aaKnown RBP4.27□□□□□ -1.73
CCH1YGR217W PEP1P32319 1579 aa4.27□□□□□ -1.73
CCH1YGR217W SSK2P53599 1579 aa4.17□□□□□ -1.74
CCH1YGR217W REV3P14284 1504 aa4.14□□□□□ -1.75
CCH1YGR217W HSL1P34244 1518 aa4.11□□□□□ -1.75
CCH1YGR217W MYO2P19524 1574 aaKnown RBP4.09□□□□□ -1.75
CCH1YGR217W BNI1P41832 1953 aa4.04□□□□□ -1.76
CCH1YGR217W IRC20Q06554 1556 aa4.04□□□□□ -1.76
CCH1YGR217W SIN3P22579 1536 aa4.01□□□□□ -1.77
CCH1YGR217W MDS3P53094 1487 aa4.01□□□□□ -1.77
CCH1YGR217W ATG2P53855 1592 aa3.99□□□□□ -1.77
CCH1YGR217W MET5P47169 1442 aa3.95□□□□□ -1.78
CCH1YGR217W HIR3P47171 1648 aa3.93□□□□□ -1.78
CCH1YGR217W RSE1Q04693 1361 aaKnown RBP3.93□□□□□ -1.78
CCH1YGR217W BUD4P47136 1447 aa3.93□□□□□ -1.78
CCH1YGR217W SPT6P23615 1451 aaKnown RBP3.92□□□□□ -1.78
CCH1YGR217W DNF1P32660 1571 aa3.87□□□□□ -1.79
CCH1YGR217W YCF1P39109 1515 aaKnown RBP3.85□□□□□ -1.79
CCH1YGR217W TY1B-BRQ12193 1756 aa3.84□□□□□ -1.79
CCH1YGR217W TY1B-GR3Q12316 1755 aa3.84□□□□□ -1.79
CCH1YGR217W TY1B-ORQ92393 1755 aa3.84□□□□□ -1.79
CCH1YGR217W LTE1P07866 1435 aa3.82□□□□□ -1.8
CCH1YGR217W RPO31P04051 1460 aa3.82□□□□□ -1.8
CCH1YGR217W ECM5Q03214 1411 aa3.81□□□□□ -1.8
CCH1YGR217W HAP1P0CE41 1502 aa3.81□□□□□ -1.8
CCH1YGR217W BPT1P14772 1559 aa3.8□□□□□ -1.8
CCH1YGR217W CDC25P04821 1589 aa3.79□□□□□ -1.8
CCH1YGR217W RPA190P10964 1664 aaKnown RBP3.77□□□□□ -1.81
CCH1YGR217W ESC1Q03661 1658 aaKnown RBP3.77□□□□□ -1.81
CCH1YGR217W TY1B-HO13535 1793 aa3.76□□□□□ -1.81
CCH1YGR217W TY1B-DR5P0C2I2 1755 aa3.76□□□□□ -1.81
CCH1YGR217W TY1B-DR6P0C2I3 1755 aa3.76□□□□□ -1.81
CCH1YGR217W TY1B-LR2P0C2I5 1755 aa3.76□□□□□ -1.81
CCH1YGR217W TY1B-LR3P0C2I6 1755 aaKnown RBP3.76□□□□□ -1.81
CCH1YGR217W TY1B-PR1P0C2I9 1755 aaKnown RBP3.76□□□□□ -1.81
CCH1YGR217W TY1B-PR2P0C2J0 1756 aa3.76□□□□□ -1.81
CCH1YGR217W TY1B-PR3P0C2J1 1755 aaKnown RBP3.76□□□□□ -1.81
CCH1YGR217W TY1B-JR1P47098 1755 aa3.76□□□□□ -1.81
CCH1YGR217W TY1B-ML2Q03434 1755 aaKnown RBP3.76□□□□□ -1.81
CCH1YGR217W TY1B-ER1Q03612 1755 aa3.76□□□□□ -1.81
CCH1YGR217W TY1B-ML1Q04711 1755 aaKnown RBP3.76□□□□□ -1.81
CCH1YGR217W TY1B-GR2Q12269 1755 aa3.76□□□□□ -1.81
CCH1YGR217W TY1B-OLQ12273 1755 aa3.76□□□□□ -1.81
CCH1YGR217W TY1B-PLQ12414 1755 aaKnown RBP3.76□□□□□ -1.81
CCH1YGR217W TY2B-LR1P0C2J3 1770 aa3.73□□□□□ -1.81
CCH1YGR217W TY2B-FP0CX63 1770 aa3.73□□□□□ -1.81
CCH1YGR217W TY2B-GR2P0CX64 1770 aa3.73□□□□□ -1.81
CCH1YGR217W TY2B-CP25384 1770 aa3.73□□□□□ -1.81
CCH1YGR217W TY2B-DR2Q03494 1770 aa3.73□□□□□ -1.81
CCH1YGR217W TY1B-DR1Q03855 1755 aa3.73□□□□□ -1.81
CCH1YGR217W TY2B-DR3Q07791 1770 aaKnown RBP3.73□□□□□ -1.81
CCH1YGR217W TY2B-OR1Q12113 1770 aa3.73□□□□□ -1.81
CCH1YGR217W TY2B-DR1Q12472 1770 aa3.73□□□□□ -1.81
CCH1YGR217W TY2B-OR2Q12501 1770 aa3.73□□□□□ -1.81
CCH1YGR217W RKR1Q04781 1562 aa3.72□□□□□ -1.81
CCH1YGR217W YPK9Q12697 1472 aa3.7□□□□□ -1.82
CCH1YGR217W SGS1P35187 1447 aa3.69□□□□□ -1.82
CCH1YGR217W ESP1Q03018 1630 aa3.69□□□□□ -1.82
CCH1YGR217W YRF1-1P0CX20 1796 aa3.68□□□□□ -1.82
CCH1YGR217W YRF1-5P0CX21 1796 aa3.68□□□□□ -1.82
CCH1YGR217W YRF1-8P0CX22 1796 aa3.68□□□□□ -1.82
CCH1YGR217W DNF2Q12675 1612 aa3.67□□□□□ -1.82
CCH1YGR217W TY2B-BQ12491 1770 aa3.66□□□□□ -1.82
CCH1YGR217W YOR093CQ12275 1648 aa3.66□□□□□ -1.82
CCH1YGR217W SCC2Q04002 1493 aa3.66□□□□□ -1.82
CCH1YGR217W MIF2P35201 549 aa3.65□□□□□ -1.82
CCH1YGR217W TY1B-DR3Q99231 1755 aa3.65□□□□□ -1.83
CCH1YGR217W RPO21P04050 1733 aaKnown RBP3.63□□□□□ -1.83
CCH1YGR217W TY1B-JR2P47100 1755 aaKnown RBP3.62□□□□□ -1.83
CCH1YGR217W TY1B-ER2Q03619 1755 aa3.62□□□□□ -1.83
CCH1YGR217W TY1B-MR1Q04214 1755 aa3.62□□□□□ -1.83
CCH1YGR217W TY1B-MR2Q04670 1755 aaKnown RBP3.62□□□□□ -1.83
CCH1YGR217W TY1B-LR1Q12088 1755 aaKnown RBP3.62□□□□□ -1.83
CCH1YGR217W TY1B-NL1Q12112 1755 aa3.62□□□□□ -1.83
CCH1YGR217W TY1B-GR1Q12141 1755 aa3.62□□□□□ -1.83
CCH1YGR217W TY1B-BLQ12490 1755 aa3.62□□□□□ -1.83
CCH1YGR217W PDR15Q04182 1529 aaKnown RBP3.61□□□□□ -1.83
CCH1YGR217W CHD1P32657 1468 aa3.6□□□□□ -1.83
CCH1YGR217W PDR12Q02785 1511 aa3.59□□□□□ -1.83
CCH1YGR217W TAF2P23255 1407 aa3.59□□□□□ -1.84
CCH1YGR217W XRN1P22147 1528 aaKnown RBP3.57□□□□□ -1.84
CCH1YGR217W PAN1P32521 1480 aa3.57□□□□□ -1.84
CCH1YGR217W VPS15P22219 1454 aa3.57□□□□□ -1.84
CCH1YGR217W GEA2P39993 1459 aaKnown RBP3.56□□□□□ -1.84
CCH1YGR217W SNT2P53127 1403 aa3.55□□□□□ -1.84
CCH1YGR217W SPO14P36126 1683 aa3.55□□□□□ -1.84
CCH1YGR217W NTE1Q04958 1679 aa3.53□□□□□ -1.84
CCH1YGR217W DOP1Q03921 1698 aa3.49□□□□□ -1.85
CCH1YGR217W TRM3Q07527 1436 aa3.48□□□□□ -1.85
CCH1YGR217W TY3B-GQ99315 1547 aa3.47□□□□□ -1.85
CCH1YGR217W TOP2P06786 1428 aaKnown RBP3.47□□□□□ -1.85
CCH1YGR217W TRM732Q03496 1420 aa3.44□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms