Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CLCN1P35523 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC22.66■■□□□ 1.22
CLCN1P35523 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CLCN1P35523 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLCN1P35523 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CLCN1P35523 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLCN1P35523 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.66■■□□□ 1.22
CLCN1P35523 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CLCN1P35523 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLCN1P35523 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLCN1P35523 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
CLCN1P35523 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLCN1P35523 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
CLCN1P35523 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.65■■□□□ 1.22
CLCN1P35523 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC22.65■■□□□ 1.22
CLCN1P35523 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
CLCN1P35523 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC22.65■■□□□ 1.22
CLCN1P35523 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
CLCN1P35523 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLCN1P35523 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
CLCN1P35523 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLCN1P35523 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.65■■□□□ 1.22
CLCN1P35523 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.65■■□□□ 1.22
CLCN1P35523 TPRG1LP1-201ENST00000598702 760 ntBASIC22.65■■□□□ 1.22
CLCN1P35523 AL354811.1-201ENST00000610286 706 ntBASIC22.65■■□□□ 1.22
CLCN1P35523 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLCN1P35523 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLCN1P35523 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CLCN1P35523 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CLCN1P35523 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CLCN1P35523 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLCN1P35523 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLCN1P35523 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
CLCN1P35523 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLCN1P35523 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.64■■□□□ 1.22
CLCN1P35523 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
CLCN1P35523 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CLCN1P35523 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.22
CLCN1P35523 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CLCN1P35523 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC22.64■■□□□ 1.21
CLCN1P35523 IRS3P-201ENST00000223076 1006 ntBASIC22.64■■□□□ 1.21
CLCN1P35523 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CLCN1P35523 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.64■■□□□ 1.21
CLCN1P35523 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.64■■□□□ 1.21
CLCN1P35523 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.64■■□□□ 1.21
CLCN1P35523 AL358852.1-201ENST00000623174 1268 ntBASIC22.64■■□□□ 1.21
CLCN1P35523 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CLCN1P35523 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CLCN1P35523 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
CLCN1P35523 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CLCN1P35523 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CLCN1P35523 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CLCN1P35523 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC22.64■■□□□ 1.21
CLCN1P35523 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC22.64■■□□□ 1.21
CLCN1P35523 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CLCN1P35523 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.64■■□□□ 1.21
CLCN1P35523 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CLCN1P35523 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC22.64■■□□□ 1.21
CLCN1P35523 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC22.64■■□□□ 1.21
CLCN1P35523 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC22.64■■□□□ 1.21
CLCN1P35523 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CLCN1P35523 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLCN1P35523 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CLCN1P35523 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLCN1P35523 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CLCN1P35523 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLCN1P35523 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLCN1P35523 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLCN1P35523 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CLCN1P35523 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLCN1P35523 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
CLCN1P35523 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CLCN1P35523 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.63■■□□□ 1.21
CLCN1P35523 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.63■■□□□ 1.21
CLCN1P35523 MIR6084-201ENST00000622012 110 ntBASIC22.63■■□□□ 1.21
CLCN1P35523 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLCN1P35523 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CLCN1P35523 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
CLCN1P35523 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.63■■□□□ 1.21
CLCN1P35523 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLCN1P35523 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
CLCN1P35523 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLCN1P35523 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
CLCN1P35523 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CLCN1P35523 AC135050.7-201ENST00000624508 2218 ntBASIC22.62■■□□□ 1.21
CLCN1P35523 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLCN1P35523 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLCN1P35523 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
CLCN1P35523 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC22.62■■□□□ 1.21
CLCN1P35523 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC22.62■■□□□ 1.21
CLCN1P35523 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
CLCN1P35523 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLCN1P35523 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.62■■□□□ 1.21
CLCN1P35523 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLCN1P35523 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.62■■□□□ 1.21
CLCN1P35523 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.62■■□□□ 1.21
CLCN1P35523 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLCN1P35523 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLCN1P35523 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLCN1P35523 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms